yaaN

yaaN
168

unknown

Locus
BSU_00260
Molecular weight
43.67 kDa
Isoelectric point
5.6
Protein length
386 aaSequenceBlast
Gene length
1161 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
yaaN
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG3853 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
36,478  37,638
The protein
Protein family
TelA family (together with YceH) (according to UniProt)
Structure
P37535 (AlphaFold)
Paralogous protein(s)
YceH
Expression and Regulation
Operons
Genes
xpaC-yaaN-yaaO-tmk-darA-yaaR-holB-ricT-yabA-trmN6-yazA-yabC
Description
PubMed
Open in new tab

xpaC→yabC

2025-03-25 19:55:04

Jstuelk

196

adcd0181c3bf7f5a66d1644d176d0c60f2121a3a

87CEB0D67D1455F48A42F665A0B9A91B779AEC5D

Genes
xpaC-yaaN-yaaO
Description
PubMed
Regulation
expressed in stationary phase
Sigma factors
SigW: sigma factor, PubMed, in sigW regulon
SigK: sigma factor, PubMed, in sigK regulon
Open in new tab

xpaC→yaaO

2025-04-07 11:19:05

ghost

146

7abb07cd575ba41a995431f6ebc94468beb3ee78

DCAF5B7EFE6C076A4C00A688D242AC2F436F8CAC

Biological materials
Mutant
MGNA-B895 (yaaN::erm), available at the NBRP B. subtilis, Japan
BKE00260 (yaaN::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_GTTCATCGCTCTTACCCTCT,  downstream forward: _UP4_TGATTACCAGTAAGTCTGGC
BKK00260 (yaaN::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_GTTCATCGCTCTTACCCTCT,  downstream forward: _UP4_TGATTACCAGTAAGTCTGGC
GP640 (''yaaN::kan'' trpC2), available in Jörg Stülke's lab
Two-hybrid system
B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Jörg Stülke's lab
References
Nicolas P, Mäder U, Dervyn E, Rochat T, Leduc A, Pigeonneau N, Bidnenko E, Marchadier E, Hoebeke M, Aymerich S, Becher D, Bisicchia P, Botella E, Delumeau O, Doherty G, Denham EL, Fogg MJ, Fromion V, Goelzer A, Hansen A, Härtig E, Harwood CR, Homuth G, Jarmer H, Jules M, Klipp E, Le Chat L, Lecointe F, Lewis P, Liebermeister W, March A, Mars RA, Nannapaneni P, Noone D, Pohl S, Rinn B, Rügheimer F, Sappa PK, Samson F, Schaffer M, Schwikowski B, Steil L, Stülke J, Wiegert T, Devine KM, Wilkinson AJ, van Dijl JM, Hecker M, Völker U, Bessières P, Noirot P Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis. Science (New York, N.Y.). 2012 Mar 02; 335(6072):1103-6. doi:10.1126/science.1206848. PMID:22383849
Huang X, Gaballa A, Cao M, Helmann JD Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W. Molecular microbiology. 1999 Jan; 31(1):361-71. . PMID:9987136

5231A0EE9C5A7556817B686D5B2B7B72B675BCAC

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Time of last update: 2025-04-07 12:26:56

Author of last update: LKrueger