Difference between revisions of "DnaN"

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* '''Description:''' write here <br/><br/>
 
* '''Description:''' write here <br/><br/>
  
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    {| align="right" border="1" cellpadding="2"  
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{| align="right" border="1" cellpadding="2"  
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    |-
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|-
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    |style="background:#ABCDEF;" align="center"|'''Gene name'''
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|style="background:#ABCDEF;" align="center"|'''Gene name'''
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    |''dnaN''
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|''dnaN''
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    |-
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|-
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    |style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''dnaG, dnaK ''
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|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''dnaG, dnaK ''
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    |-
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|-
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    |style="background:#ABCDEF;" align="center"| '''Essential''' ||  
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|style="background:#ABCDEF;" align="center"| '''Essential''' ||  
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    |-
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|-
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    |style="background:#ABCDEF;" align="center"| '''Product''' || DNA polymerase III (beta subunit) (EC 2.7.7.7)
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|style="background:#ABCDEF;" align="center"| '''Product''' || DNA polymerase III (beta subunit) (EC 2.7.7.7)
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    |-
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|-
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    |style="background:#ABCDEF;" align="center"|'''Function''' ||  
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|style="background:#ABCDEF;" align="center"|'''Function''' ||  
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    |-
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|-
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    |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 4.718   
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 4.718   
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    |-
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|-
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    |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1134 bp, 378 aa  
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|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1134 bp, 378 aa  
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    |-
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|-
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    |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' ||  
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    |-
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|-
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    |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/dnaN_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/dnaN_nucleotide.txt    Gene sequence      (+200bp)  ]'''  
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    |style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/dnaN_protein.txt Protein sequence]'''
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|style="background:#FAF8CC;" align="center"|'''[http://subtiwiki.uni-goettingen.de/dnaN_protein.txt Protein sequence]'''
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    |-
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|-
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    |colspan="2" | '''Genetic context''' <br/> [[Image:dnaN_context.gif]]
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|colspan="2" | '''Genetic context''' <br/> [[Image:dnaN_context.gif]]
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    |-
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|-
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    |}
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|}
  
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    __TOC__
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__TOC__
  
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    <br/><br/>
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<br/><br/>
  
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    =The gene=
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=The gene=
  
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    === Basic information ===
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=== Basic information ===
  
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    * '''Coordinates:'''
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* '''Coordinates:'''
  
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    ===Phenotypes of a mutant ===
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===Phenotypes of a mutant ===
  
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    === Database entries ===
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=== Database entries ===
  
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    * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/dnaN.html]
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* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/dnaN.html]
  
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    * '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10066]
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* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG10066]
  
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    === Additional information===
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=== Additional information===
  
  
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    =The protein=
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=The protein=
  
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    === Basic information/ Evolution ===
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=== Basic information/ Evolution ===
  
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    * '''Catalyzed reaction/ biological activity:'''  
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* '''Catalyzed reaction/ biological activity:'''  
  
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    * '''Protein family:'''
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* '''Protein family:'''
  
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    * '''Paralogous protein(s):'''
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* '''Paralogous protein(s):'''
  
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    === Extended information on the protein ===
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=== Extended information on the protein ===
  
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    * '''Kinetic information:'''
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* '''Kinetic information:'''
  
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    * '''Domains:'''  
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* '''Domains:'''  
  
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    * '''Modification:'''
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* '''Modification:'''
  
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    * '''Cofactor(s):'''
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* '''Cofactor(s):'''
  
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    * '''Effectors of protein activity:'''
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* '''Effectors of protein activity:'''
  
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    * '''Interactions:'''
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* '''Interactions:'''
  
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    * '''Localization:'''
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* '''Localization:'''
  
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    === Database entries ===
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=== Database entries ===
  
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    * '''Structure:'''
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* '''Structure:'''
  
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    * '''Swiss prot entry:'''
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* '''Swiss prot entry:'''
  
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    * '''KEGG entry:'''
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* '''KEGG entry:'''
  
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    * '''E.C. number:'''
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* '''E.C. number:'''
  
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    === Additional information===
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=== Additional information===
  
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    =Expression and regulation=
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=Expression and regulation=
  
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    * '''Operon:'''  
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* '''Operon:'''  
  
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    * '''Sigma factor:'''  
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* '''Sigma factor:'''  
  
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    * '''Regulation:'''  
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* '''Regulation:'''  
  
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    * '''Regulatory mechanism:'''  
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* '''Regulatory mechanism:'''  
  
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    * '''Additional information:'''  
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* '''Additional information:'''  
  
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    =Biological materials =
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=Biological materials =
  
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    * '''Mutant:'''
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* '''Mutant:'''
  
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    * '''Expression vector:'''
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* '''Expression vector:'''
−
           
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    * '''lacZ fusion:'''
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* '''lacZ fusion:'''
  
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    * '''GFP fusion:'''
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* '''GFP fusion:'''
  
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    * '''two-hybrid system:'''  
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* '''two-hybrid system:'''  
  
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    * '''Antibody:'''
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* '''Antibody:'''
  
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    =Labs working on this gene/protein=
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=Labs working on this gene/protein=
  
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    =Your additional remarks=
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=Your additional remarks=
  
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    =References=
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=References=
  
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    # Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]
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# Author1, Author2 & Author3 (year) Title ''Journal'' '''volume:''' page-page. [http://www.ncbi.nlm.nih.gov/sites/entrez/PMID PubMed]

Revision as of 17:21, 29 January 2009

  • Description: write here

Gene name dnaN
Synonyms dnaG, dnaK
Essential
Product DNA polymerase III (beta subunit) (EC 2.7.7.7)
Function
MW, pI 41 kDa, 4.718
Gene length, protein length 1134 bp, 378 aa
Immediate neighbours
Gene sequence (+200bp) Protein sequence
Genetic context
DnaN context.gif



The gene

Basic information

  • Coordinates:

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • Swiss prot entry:
  • KEGG entry:
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

  1. Author1, Author2 & Author3 (year) Title Journal volume: page-page. PubMed
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