yybE

yybE
168

similar to transcriptional regulator (LysR family)

Locus
BSU_40670
Molecular weight
31.26 kDa
Isoelectric point
7.3
Protein length
292 aaSequenceBlast
Gene length
879 bpSequenceBlast
Function
unknown
Product
transcriptional regulator (LysR family)
Essential
no
Synonyms
yybE
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0583 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
4,180,564  4,181,442
The protein
Protein family
LysR family (according to UniProt)
Domains
HTH lysR-type domain (aa 1-58) (according to UniProt)
Structure
4X6G (PDB) (OxyR from Pseudomonas aeruginosa, 28% identity) PubMed
P37499 (AlphaFold)
Expression and Regulation
Operons
Genes
yybE-yybD-yybC
Description
PubMed
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yybE→yybC

2025-03-27 00:11:07

Jstuelk

71

d1d6a9a2783f599617c6fcdfeafdbeb70047978e

88282EDDE31BC6122A49D4D16E0D2482942838CF

Biological materials
Mutant
MGNA-B849 (yybE::erm), available at the NBRP B. subtilis, Japan
BKE40670 (yybE::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATTATCATCTCTCCTTAT,  downstream forward: _UP4_TTTTCTGAGTAGGAAGGATT
BKK40670 (yybE::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CAATTATCATCTCTCCTTAT,  downstream forward: _UP4_TTTTCTGAGTAGGAAGGATT
References
Research papers
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9EC2800AF5B2B65BE3DEB4ABCCE7E448A24440DF

Page visits: 2168

Time of last update: 2025-04-03 11:43:22

Author of last update: Melvin.boenninger