yvdR

yvdR
168

similar to multidrug-efflux transporter

Locus
BSU_34500
Molecular weight
11.29 kDa
Isoelectric point
9.06
Protein length
106 aaSequenceBlast
Gene length
321 bpSequenceBlast
Function
unknown
Product
subunit of unidentified multidrug transporter
Essential
no
Synonyms
yvdR
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2076 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,541,823  3,542,143
The protein
Protein family
paired small multidrug resistance  protein family (PSMR family) PubMed
drug/metabolite transporter (DMT) superfamily (according to UniProt)
Small multidrug resistance (SMR) (TC 2.A.7.1) family (according to UniProt)
Structure
3B5D (PDB) (E. coli EmrE, 33% identity) PubMed
O06999 (AlphaFold)
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
yvdT-yvdS-yvdR
Description
PubMed
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yvdT→yvdR

2025-04-02 13:45:37

Jstuelk

92

1b3e50dddbc6cea33557d614c43c379ad9551d6a

363164D2584B836A44C7C269AD6EB7DF366C5946

Biological materials
Mutant
MGNA-B618 (yvdR::erm), available at the NBRP B. subtilis, Japan
BKE34500 (yvdR::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTATTTTTCACCTCCCGG,  downstream forward: _UP4_TAAAATCAAGGCATATACAG
BKK34500 (yvdR::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATTATTTTTCACCTCCCGG,  downstream forward: _UP4_TAAAATCAAGGCATATACAG
References
Research papers
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18CBED273AD7787971073117DFA0B89BDF149B25

Page visits: 2355

Time of last update: 2025-04-06 19:47:37

Author of last update: Melvin.boenninger