Difference between revisions of "GerE"

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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU28410&redirect=T BSU28410]
  
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/gerE.html]
 
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/gerE.html]
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=== Database entries ===
 
=== Database entries ===
 +
* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU28410&redirect=T BSU28410]
  
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1FSE 1FSE]
 
* '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1FSE 1FSE]

Revision as of 14:26, 2 April 2014

  • Description: transcriptional regulator (repressor or activator) of a subset of sigma-K-dependent late spore coat genes

Gene name gerE
Synonyms
Essential no
Product transcriptional regulator (LuxR-FixJ family)
Function regulation of SigK-dependent gene expression
Gene expression levels in SubtiExpress: gerE
Function and regulation of this protein in SubtiPathways:
gerE
MW, pI 8 kDa, 9.635
Gene length, protein length 222 bp, 74 aa
Immediate neighbours ysmB, ysmA
Sequences Protein DNA DNA_with_flanks
Genetic context
GerE context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GerE expression.png















Categories containing this gene/protein

transcription factors and their control, germination

This gene is a member of the following regulons

SigK regulon

The GerE regulon

The gene

Basic information

  • Locus tag: BSU28410

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: LuxR-FixJ family of transcription regulators
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References