Difference between revisions of "MgsR"
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| − | * '''Description:''' transcriptional regulator of a subset of the [[SigB]] general stress regulon <br/><br/>  | + | * '''Description:''' transcriptional regulator of a subset of the [[SigB]] general stress regulon, required for protection against oxidative stress  <br/><br/>  | 
{| align="right" border="1" cellpadding="2"    | {| align="right" border="1" cellpadding="2"    | ||
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24770 mgsR]  | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24770 mgsR]  | ||
|-  | |-  | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://  | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://subtiwiki.uni-goettingen.de/interact/ ''Subt''Interact]''': [http://subtiwiki.uni-goettingen.de/interact/index.php?protein=MgsR MgsR]  | 
|-  | |-  | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 14 kDa, 9.28     | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 14 kDa, 9.28     | ||
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  <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>  |   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>  | ||
|-  | |-  | ||
| − | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mgsR_2564026_2564406_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:mgsR_expression.png|500px]]  | + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mgsR_2564026_2564406_-1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:mgsR_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24770]]  | 
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= [[Categories]] containing this gene/protein =  | = [[Categories]] containing this gene/protein =  | ||
{{SubtiWiki category|[[transcription factors and their control]]}},  | {{SubtiWiki category|[[transcription factors and their control]]}},  | ||
| − | {{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}}  | + | {{SubtiWiki category|[[general stress proteins (controlled by SigB)]]}},  | 
| + | {{SubtiWiki category|[[resistance against oxidative and electrophile stress]]}}  | ||
= This gene is a member of the following [[regulons]] =  | = This gene is a member of the following [[regulons]] =  | ||
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=== Database entries ===  | === Database entries ===  | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU24770&redirect=T BSU24770]  | ||
* '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yqgZ.html]  | * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yqgZ.html]  | ||
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=== Database entries ===  | === Database entries ===  | ||
| + | * '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=BSU24770&redirect=T BSU24770]  | ||
* '''Structure:'''	  | * '''Structure:'''	  | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mgsR_2564026_2564406_-1 mgsR] {{PubMed|22383849}}  | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mgsR_2564026_2564406_-1 mgsR] {{PubMed|22383849}}  | ||
| − | * '''Sigma factor:''' [[SigB]] {{PubMed|18643936}}  | + | * '''[[Sigma factor]]:''' [[SigB]] {{PubMed|18643936}}  | 
* '''Regulation:'''    | * '''Regulation:'''    | ||
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=References=  | =References=  | ||
| − | + | <pubmed>18643936, 12107147 15805528 18643936,22812682 22582280</pubmed>  | |
| − | <pubmed>18643936, 12107147 15805528 18643936, </pubmed>  | ||
[[Category:Protein-coding genes]]  | [[Category:Protein-coding genes]]  | ||
Latest revision as of 14:13, 2 April 2014
-  Description: transcriptional regulator of a subset of the SigB general stress regulon, required for protection against oxidative stress  
 
| Gene name | mgsR | 
| Synonyms | yqgZ | 
| Essential | no | 
| Product | transcriptional regulator | 
| Function | controls a subset of general stress genes | 
| Gene expression levels in SubtiExpress: mgsR | |
| Interactions involving this protein in SubtInteract: MgsR | |
| MW, pI | 14 kDa, 9.28 | 
| Gene length, protein length | 378 bp, 126 aa | 
| Immediate neighbours | trnSL-Gln1, yqgY | 
| Sequences | Protein DNA DNA_with_flanks | 
 Genetic context  
  This image was kindly provided by SubtiList 
 | |
Expression at a glance   PubMed 
 | |
Contents
Categories containing this gene/protein
transcription factors and their control, general stress proteins (controlled by SigB), resistance against oxidative and electrophile stress
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU24770
 
Phenotypes of a mutant
Database entries
- BsubCyc: BSU24770
 
- DBTBS entry: [1]
 
- SubtiList entry: [2]
 
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: exerts a positive or negative effect on the expression of 53 or 18 stress genes, respectively PubMed
 
- Protein family: arsC family (according to Swiss-Prot) Arsenate Reductase (ArsC) family, Spx subfamily
 
- Paralogous protein(s): Spx
 
Extended information on the protein
- Kinetic information:
 
- Domains:
 
- Modification:
 
- Cofactor(s):
 
- Effectors of protein activity:
 
Database entries
- BsubCyc: BSU24770
 
- Structure:
 
- UniProt: P54503
 
- KEGG entry: [3]
 
- E.C. number:
 
Additional information
Expression and regulation
- Operon: mgsR PubMed
 
-  Regulatory mechanism: 
- MgsR: transcription activation PubMed
 
 - Additional information:
 
Biological materials
- Mutant:
 
- Expression vector:
 
- lacZ fusion:
 
- GFP fusion:
 
- two-hybrid system:
 
- Antibody:
 
Labs working on this gene/protein
Your additional remarks
References

