sodF

sodF
168

superoxide dismutase

Locus
BSU_19330
Molecular weight
33.32 kDa
Isoelectric point
6.17
Protein length
281 aaSequenceBlast
Gene length
846 bpSequenceBlast
Function
detoxification of oxygen radicals
Product
superoxide dismutase
Essential
no
Synonyms
sodF
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG0605 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
2,104,056 → 2,104,901
The protein
Catalyzed reaction/ biological activity
2 superoxide + 2 H+ --> O2 + H2O2 (according to UniProt)
Protein family
iron/manganese superoxide dismutase family (with SodA, according to UniProt)
Cofactors
contains an iron-sulfur cluster
Structure
3EVK (PDB) (aa 80 ... 280, from Pyrobaculum aerophilum, 54% identity)
O35023 (AlphaFold)
Paralogous protein(s)
SodA
Expression and Regulation
Operons
Genes
sqhC-sodF
Description
PubMed
Regulation
expressed during sporulation in the mother cell PubMed
Sigma factors
SigE: sigma factor, PubMed, in sigE regulon
Open in new tab

sqhC→sodF

2025-04-04 21:26:00

ghost

83

6fa4c70048aebc58f3cffd6e248603b84d1b4262

DF3BA7099188F609C6B2A0A09963B06207F9360B

Biological materials
Mutant
BKE19330 (ΔsodF::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_ATTGAACATCTCCGCTTGAT,  downstream forward: _UP4_TAAAAAAAGCCCCCTTTCCT
BKK19330 (ΔsodF::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_ATTGAACATCTCCGCTTGAT,  downstream forward: _UP4_TAAAAAAAGCCCCCTTTCCT
References
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E0645DD4A7A871457300139A7E5986EF11C07387

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Time of last update: 2025-04-10 12:41:10

Author of last update: Melvin.boenninger