yndF

yndF
168

part of the YndD-YndE-YndF germinant receptor of unknown specificity

Locus
BSU_17770
Molecular weight
44.66 kDa
Isoelectric point
7.26
Protein length
404 aaSequenceBlast
Gene length
1215 bpSequenceBlast
Function
Germination
Product
part of the YndD-YndE-YndF germinant receptor
Essential
no
Synonyms
yndF
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG5903 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,910,167  1,911,381
The protein
Protein family
GerABKC lipoprotein family (according to UniProt)
Structure
3N54 (PDB) (GerBC, 29% identity) PubMed
O31810 (AlphaFold)
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
yndD-yndE-yndF
Description
PubMed
Regulation
expressed late during sporulation in the forespore (SigG) PubMed
Sigma factors
SigG: sigma factor, PubMed, in sigG regulon
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yndD→yndF

2025-04-08 16:23:12

ghost

116

2475fc3f605374c7d03f837ccdb4b7cf919dd1e9

8FEE9610941E29EE00A37E1F39BFC210F89F0F5C

Biological materials
Mutant
MGNA-A024 (yndF::erm), available at the NBRP B. subtilis, Japan
BKE17770 (yndF::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAGCAGGCAATTGACGTT,  downstream forward: _UP4_TAATGAATCCCAAGGAAGAG
BKK17770 (yndF::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CATAGCAGGCAATTGACGTT,  downstream forward: _UP4_TAATGAATCCCAAGGAAGAG
References
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2211659780DEC3F4131B127E68EEF626534DF4BE

Page visits: 4164

Time of last update: 2025-04-09 22:00:40

Author of last update: Melvin.boenninger