xkdM

xkdM
168

PBSX prophage, similar to R-Type bacteriocin tube protein

Locus
BSU_12660
Molecular weight
16.21 kDa
Isoelectric point
4.58
Protein length
147 aaSequenceBlast
Gene length
444 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
xkdM
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms

This gene is a member of the following regulons

Gene
Coordinates
1,333,804  1,334,247
The protein
Structure
2GUJ (PDB)
P54332 (AlphaFold)
Paralogous protein(s)
YqbM, Array
Localization
extracellular (no signal peptide) PubMed
Expression and Regulation
Operons
Genes
xtmA-xtmB-xkdE-xkdF-xkdG-xkdH-xkdI-xkdJ-xkdK-xkdM-xkdN-xkzB-xkdO-xkdP-xkdQ-xkdR-xkdS-xkdT-xkdU-xkzA-xkdV-xkdW-xkdX-xepA-xhlA-xhlB-xlyA
Description
PubMed
Regulation
expression during spore germination is strongly reduced under conditions of osmotic stress PubMed
Sigma factors
Xpf: sigma factor, PubMed, in xpf regulon
Open in new tab

xtmA→xlyA

2025-03-22 19:13:04

Jstuelk

142

cf834a1eded0c80a87b885b56423c31a910431c3

B52CA80EBED69B6B9017B7E04DFFD42F17910C15

Biological materials
Mutant
BKE12660 (xkdM::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TGTGTTTTGTGCTTTTAATG,  downstream forward: _UP4_TAATCAAAGCTGAATCAGCC
BKK12660 (xkdM::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TGTGTTTTGTGCTTTTAATG,  downstream forward: _UP4_TAATCAAAGCTGAATCAGCC
References
Loading

683D350D98AC0D27951145AD87830B89C0B4F393

Page visits: 4713

Time of last update: 2025-04-11 08:45:48

Author of last update: Jstuelk