yjmD

yjmD
168

galactitol-1-phosphate dehydrogenase

Locus
BSU_12330
Molecular weight
36.61 kDa
Isoelectric point
6.11
Protein length
339 aaSequenceBlast
Gene length
1020 bpSequenceBlast
Function
utilization of dulcitol
Product
galactitol-1-phosphate dehydrogenase
Essential
no
Synonyms
yjmD
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG1063 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
1,304,442 → 1,305,461
The protein
Protein family
zinc-containing alcohol dehydrogenase family (according to UniProt)
Structure
4ILK (PDB) (from E. coli, 40% identity)
O35045 (AlphaFold)
Expression and Regulation
Operons
Genes
yjmC-yjmD-uxuA-yjmF-exuT-exuR-uxaB-uxaA
Description
PubMed
Regulation
induced by galacturonate (ExuR) PubMed
Regulatory mechanism
ExuR: repression, in the absence of inducer, in exuR regulon
CcpA: repression, PubMed PubMed, in ccpA regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
SigE: sigma factor, PubMed, in sigE regulon
Open in new tab

yjmC→uxaA

2025-04-08 12:07:13

ghost

93

e9b60dda83535baf9252c89c7130d2fdeb844e6f

417675688A3DB0A933113CA632D3321516D969A2

Genes
uxaC-yjmB-yjmC-yjmD-uxuA-yjmF-exuT-exuR-uxaB-uxaA
Description
PubMed
Regulation
induced by galacturonate (ExuR) PubMed
Regulatory mechanism
ExuR: repression, in the absence of inducer, in exuR regulon
CcpA: repression, PubMed PubMed, in ccpA regulon
Sigma factors
SigA: sigma factor, PubMed, in sigA regulon
Open in new tab

uxaC→uxaA

2025-04-03 12:22:40

ghost

96

0325999ea185bfaaf2dea87e1701479c52256033

A15F6E93B04DC8C4B59B7976DAC34CE9AC0B8E51

Biological materials
Mutant
MGNA-A368 (yjmD::erm), available at the NBRP B. subtilis, Japan
BKE12330 (ΔyjmD::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACTTGAACCGCTTTCATTT,  downstream forward: _UP4_TAAATGACTGAATCCGGAGG
BKK12330 (ΔyjmD::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_CACTTGAACCGCTTTCATTT,  downstream forward: _UP4_TAAATGACTGAATCCGGAGG
References
Loading

CC55984E31C5698668CCCD4AC6E2210B2B41ACAB

Page visits: 3620

Time of last update: 2025-04-12 17:38:50

Author of last update: Jstuelk