ydhU/1

ydhU/1
168

similar to Mn catalase, inactive pseudogene in strain 168

Locus
BSU_05890
Protein length
242 aaSequenceBlast
Gene length
729 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
Synonyms
ydhU/1, ydhU
Outlinks
BsubCyc SubtiList Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

This gene is a member of the following regulons

Gene
Coordinates
633,923 → 634,651
Phenotypes of a mutant
thsi is a pseudogene in B. subtilis 168
The protein
Protein family
manganese catalase family (according to Swiss-Prot)
Structure
2CWL (PDB) (pseudokatalase from Thermus thermophilus, 44% identity)
Expression and Regulation
Operons
Genes
ydhU/2-ydhU/1
Description
PubMed
Regulatory mechanism
Fur: repression, in fur regulon
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ydhU/2->ydhU/1

2025-03-17 15:59:13

Bzhu

75

422e9aca8379f80622d7a3a34178cf723bfd7f05

609F6050D8BFE6F2C4F99EC218F6579C28F15CCC

Biological materials
Mutant
MGNA-C196 (ydhU::erm), available at the NBRP B. subtilis, Japan
BKE05890 (ΔydhU/1::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TCTGAAATTAGAGCTTTGGA,  downstream forward: _UP4_TAATCCAGTGGGAAGGTGCT
BKK05890 (ΔydhU/1::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TCTGAAATTAGAGCTTTGGA,  downstream forward: _UP4_TAATCCAGTGGGAAGGTGCT
References
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Time of last update: 2025-04-04 15:52:52

Author of last update: Jstuelk