Difference between revisions of "YwqJ"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| − | {{SubtiWiki category|[[toxins, antitoxins and immunity against toxins]]}} | + | {{SubtiWiki category|[[toxins, antitoxins and immunity against toxins]]}}, |
| + | {{SubtiWiki category|[[sporulation proteins]]}} | ||
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= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[ywqH]]-[[ywqI]]-[[ywqJ]]-[[ywqK]]-[[ywqL]]'' {{PubMed|22383849}} |
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywqJ_3725600_3727408_-1 ywqJ] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ywqJ_3725600_3727408_-1 ywqJ] {{PubMed|22383849}} | ||
Revision as of 10:06, 29 November 2013
- Description: putative toxin
| Gene name | ywqJ |
| Synonyms | |
| Essential | no |
| Product | putative toxin |
| Function | unknown |
| Gene expression levels in SubtiExpress: ywqJ | |
| MW, pI | 66 kDa, 5.906 |
| Gene length, protein length | 1806 bp, 602 aa |
| Immediate neighbours | ywqK, ywqI |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
toxins, antitoxins and immunity against toxins, sporulation proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU36190
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: UPF0720 family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- YwqJ is a member of a suspected group of hubs proteins that were suggested to be involved in a large number of interactions PubMed
Database entries
- Structure:
- UniProt: P96722
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Laura E Holberger, Fernando Garza-Sánchez, James Lamoureux, David A Low, Christopher S Hayes
A novel family of toxin/antitoxin proteins in Bacillus species.
FEBS Lett: 2012, 586(2);132-6
[PubMed:22200572]
[WorldCat.org]
[DOI]
(I p)
Elodie Marchadier, Rut Carballido-López, Sophie Brinster, Céline Fabret, Peggy Mervelet, Philippe Bessières, Marie-Françoise Noirot-Gros, Vincent Fromion, Philippe Noirot
An expanded protein-protein interaction network in Bacillus subtilis reveals a group of hubs: Exploration by an integrative approach.
Proteomics: 2011, 11(15);2981-91
[PubMed:21630458]
[WorldCat.org]
[DOI]
(I p)
