Difference between revisions of "YdfD"
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[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] |
Revision as of 17:12, 21 November 2013
- Description: similar to transcriptional regulator (MocR/ GabR family)
Gene name | ydfD |
Synonyms | |
Essential | no |
Product | unknown |
Function | unknown |
Gene expression levels in SubtiExpress: ydfD | |
MW, pI | 54 kDa, 9.104 |
Gene length, protein length | 1446 bp, 482 aa |
Immediate neighbours | ydfC, ydfE |
Sequences | Protein DNA DNA_with_flanks |
Genetic context ![]() This image was kindly provided by SubtiList
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Expression at a glance PubMed![]() |
Contents
Categories containing this gene/protein
transcription factors and their control
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU05370
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: MocR/ GabR family PubMed
- Paralogous protein(s): none, but there are 7 members of the MocR/ GabR family in B. subtilis
Extended information on the protein
- Kinetic information:
- Domains: N-terminal DNA-binding helix-turn-helix motif; C-terminal domain is homologous to PLP-binding large domain of aminotransferases.
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: P96681
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References