YdbJ

• Description: similar to ABC transporter (ATP-binding protein)
  
  

Gene name	ydbJ
Synonyms
Essential	no
Product	ABC transporter (ATP-binding protein)
Function	unknown
Gene expression levels in SubtiExpress: ydbJ
Interactions involving this protein in SubtInteract: YdbJ
MW, pI	34 kDa, 4.726
Gene length, protein length	924 bp, 308 aa
Immediate neighbours	ydbI, ydbK
Sequences	Protein DNA DNA_with_flanks
Genetic context This image was kindly provided by SubtiList
Expression at a glance   PubMed

Categories containing this gene/protein

ABC transporters, membrane proteins

The gene

Basic information

• Locus tag: BSU04490

Database entries

• DBTBS entry: no entry

• SubtiList entry: [1]

The protein

Basic information/ Evolution

• Catalyzed reaction/ biological activity:

• Protein family: ABC transporter domain (according to Swiss-Prot)

• Paralogous protein(s):

Extended information on the protein

• Kinetic information:

• Domains:

• Modification:

• Cofactor(s):

• Effectors of protein activity:

• Interactions:
  • YdbJ-YdbK PubMed

• Localization: membrane associated (via YdbK) PubMed

Database entries

• Structure:

• UniProt: P96605

• KEGG entry: [2]

• E.C. number:

Expression and regulation

• Operon:

• Expression browser: ydbJ PubMed

• Sigma factor:

• Regulation:
  • strongly repressed in response to glucose starvation in M9 medium PubMed

• Regulatory mechanism:

• Additional information:

Biological materials

• Mutant:

• Expression vector:

• lacZ fusion:

• GFP fusion:

• two-hybrid system:

• Antibody:

References

Imke G de Jong, Jan-Willem Veening, Oscar P Kuipers
Single cell analysis of gene expression patterns during carbon starvation in Bacillus subtilis reveals large phenotypic variation.
Environ Microbiol: 2012, 14(12);3110-21
[PubMed:23033921] [WorldCat.org] [DOI] (I p)

Y Quentin, G Fichant, F Denizot
Inventory, assembly and analysis of Bacillus subtilis ABC transport systems.
J Mol Biol: 1999, 287(3);467-84
[PubMed:10092453] [WorldCat.org] [DOI] (P p)