Difference between revisions of "CotZ"
(→Extended information on the protein) |
|||
| Line 36: | Line 36: | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
<br/><br/><br/><br/> | <br/><br/><br/><br/> | ||
| − | + | <br/><br/> | |
| − | |||
= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
| Line 44: | Line 43: | ||
= This gene is a member of the following [[regulons]] = | = This gene is a member of the following [[regulons]] = | ||
{{SubtiWiki regulon|[[GerE regulon]]}}, | {{SubtiWiki regulon|[[GerE regulon]]}}, | ||
| + | {{SubtiWiki regulon|[[SigE regulon]]}}, | ||
{{SubtiWiki regulon|[[SigK regulon]]}} | {{SubtiWiki regulon|[[SigK regulon]]}} | ||
| Line 90: | Line 90: | ||
* '''[[Localization]]:''' | * '''[[Localization]]:''' | ||
| − | ** outermost layer of the spore coat (crust) {{PubMed|22171814}} | + | ** outermost layer of the spore coat (crust), localization depends on [[CotE]] {{PubMed|22171814}} |
** more abundant at the mother cell-proximal pole of the forespore {{PubMed|19933362,21665972}} | ** more abundant at the mother cell-proximal pole of the forespore {{PubMed|19933362,21665972}} | ||
| Line 111: | Line 111: | ||
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotZ_1249442_1249888_-1 cotZ] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cotZ_1249442_1249888_-1 cotZ] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' [[SigK]] {{PubMed|7519271,15699190}} | + | * '''Sigma factor:''' [[SigK]] {{PubMed|7519271,15699190}}, [[SigE]] {{PubMed|15383836}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 141: | Line 141: | ||
=References= | =References= | ||
| − | <pubmed>19304857,7519271,15699190, 19933362 20451384 21665972 22171814</pubmed> | + | <pubmed>19304857,7519271,15699190, 19933362 20451384 21665972 22171814 15383836 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:16, 13 August 2013
- Description: spore crust protein (insoluble fraction), necessary for the assembly of the spore crust, the outermost layer of the spore coat
| Gene name | cotZ |
| Synonyms | |
| Essential | no |
| Product | spore crust protein (insoluble fraction) |
| Function | spore crust assembly |
| Gene expression levels in SubtiExpress: cotZ | |
| Interactions involving this protein in SubtInteract: CotZ | |
| MW, pI | 16 kDa, 5.102 |
| Gene length, protein length | 444 bp, 148 aa |
| Immediate neighbours | cotO, cotY |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
GerE regulon, SigE regulon, SigK regulon
The gene
Basic information
- Locus tag: BSU11740
Phenotypes of a mutant
- mis-assembly of the spore crust PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure:
- UniProt: Q08312
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
