Difference between revisions of "RnhB"
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= [[Categories]] containing this gene/protein = | = [[Categories]] containing this gene/protein = | ||
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===Phenotypes of a mutant === | ===Phenotypes of a mutant === | ||
| + | * a ''[[rnhB]] [[rnhC]]'' double mutant grows poorly {{PubMed|23882084}} | ||
=== Database entries === | === Database entries === | ||
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rnhB_1677451_1678218_1 rnhB] {{PubMed|22383849}} | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rnhB_1677451_1678218_1 rnhB] {{PubMed|22383849}} | ||
| − | * '''Sigma factor:''' | + | * '''[[Sigma factor]]:''' |
* '''Regulation:''' | * '''Regulation:''' | ||
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<pubmed>19228197 </pubmed> | <pubmed>19228197 </pubmed> | ||
==Original publications== | ==Original publications== | ||
| − | <pubmed>9888800 10094689 12417313 17905985 </pubmed> | + | <pubmed>9888800 10094689 12417313 17905985 23882084</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 15:45, 25 July 2013
- Description: RNase HII, endoribonuclease
| Gene name | rnhB |
| Synonyms | rnh |
| Essential | no |
| Product | Mn2+-dependent RNase HII |
| Function | endonucleolytic cleavage of RNA in RNA-DNA hybrid molecules |
| Gene expression levels in SubtiExpress: rnhB | |
| MW, pI | 28 kDa, 5.518 |
| Gene length, protein length | 765 bp, 255 aa |
| Immediate neighbours | rbgA, ylqG |
| Sequences | Protein DNA DNA_with_flanks |
Genetic context 
This image was kindly provided by SubtiList
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Expression at a glance PubMed
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Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU16060
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Endonucleolytic cleavage to 5'-phosphomonoester (according to Swiss-Prot)
- Protein family: RNase HII family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- cytoplasm (according to Swiss-Prot)
Database entries
- Structure:
- UniProt: O31744
- KEGG entry: [2]
- E.C. number: 3.1.26.4.
Additional information
Expression and regulation
- Operon:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Reviews
Original publications
