Difference between revisions of "GerBC"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[gerBB]]'', ''[[ywtG]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[gerBB]]'', ''[[ywtG]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35820 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35820 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35820 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35820 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35820 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35820 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:gerBC_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:gerBC_context.gif]]

Revision as of 11:26, 14 May 2013

  • Description: lipoprotein, nutrient receptor, germination response to the combination of glucose, fructose, and KCl

Gene name gerBC
Synonyms
Essential no
Product nutrient receptor
Function germination
Gene expression levels in SubtiExpress: gerBC
Interactions involving this protein in SubtInteract: GerBC
MW, pI 42 kDa, 9.06
Gene length, protein length 1122 bp, 374 aa
Immediate neighbours gerBB, ywtG
Sequences Protein DNA DNA_with_flanks
Genetic context
GerBC context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
GerBC expression.png















Categories containing this gene/protein

germination, membrane proteins

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU35820

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: gerABKC lipoprotein family (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
    • has an N-terminal signal sequence, lipidated on a Cys residue adjacent to the signal peptide PubMed
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
    • expressed late during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed