Difference between revisions of "YvmB"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvmC]]'', ''[[yvmA]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yvmC]]'', ''[[yvmA]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35080 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35080 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35080 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU35080 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU35080 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU35080 DNA_with_flanks]
 
|-
 
|-
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yvmB_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yvmB_context.gif]]

Revision as of 11:23, 14 May 2013

  • Description: unknown

Gene name yvmB
Synonyms yzhA
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: yvmB
MW, pI 19 kDa, 8.089
Gene length, protein length 507 bp, 169 aa
Immediate neighbours yvmC, yvmA
Sequences Protein DNA DNA_with_flanks
Genetic context
YvmB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YvmB expression.png
























Categories containing this gene/protein

proteins of unknown function

This gene is a member of the following regulons

CcpA regulon

The gene

Basic information

  • Locus tag: BSU35080

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation: repressed by glucose (3.4-fold) (CcpA) PubMed, subject to carbon catabolite repression (4-fold: CcpA) PubMed
  • Regulatory mechanism: CcpA: transcription repression, CcpA: transcription repression PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Hans-Matti Blencke, Georg Homuth, Holger Ludwig, Ulrike Mäder, Michael Hecker, Jörg Stülke
Transcriptional profiling of gene expression in response to glucose in Bacillus subtilis: regulation of the central metabolic pathways.
Metab Eng: 2003, 5(2);133-49
[PubMed:12850135] [WorldCat.org] [DOI] (P p)