Difference between revisions of "SpoIIP"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqxA]]'', ''[[gpr]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqxA]]'', ''[[gpr]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU25530 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU25530 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU25530 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU25530 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU25530 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU25530 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:spoIIP_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:spoIIP_context.gif]]

Revision as of 10:46, 14 May 2013

  • Description: cell wall hydrolase with both amidase and endopeptidase activities, required for dissolution of the septal cell wall

Gene name spoIIP
Synonyms
Essential no
Product cell wall hydrolase
Function dissolution of the septal cell wall
Gene expression levels in SubtiExpress: spoIIP
Interactions involving this protein in SubtInteract: SpoIIP
MW, pI 44 kDa, 6.852
Gene length, protein length 1203 bp, 401 aa
Immediate neighbours yqxA, gpr
Sequences Protein DNA DNA_with_flanks
Genetic context
SpoIIP context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpoIIP expression.png















Categories containing this gene/protein

cell wall/ other, sporulation proteins, membrane proteins

This gene is a member of the following regulons

SigE regulon, SigF regulon, Efp-dependent proteins

The gene

Basic information

  • Locus tag: BSU25530

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: removes the stem peptides from the cell wall and cleaves the cross-links between them PubMed
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity: activity is stimulated by interaction with SpoIID PubMed

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulatory mechanism:
  • Additional information:
    • translation is likely to require Efp due to the presence of several consecutive proline residues PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References