Difference between revisions of "SpoVT"

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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mfd]]'', ''[[yabM]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mfd]]'', ''[[yabM]]''
 
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00560 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00560 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00560 Advanced_DNA]
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00560 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00560 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00560 DNA_with_flanks]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:spoVT_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:spoVT_context.gif]]

Revision as of 09:11, 14 May 2013

  • Description: transcription activator and repressor of SigG-dependent genes

Gene name spoVT
Synonyms yabL
Essential no
Product transcriptional regulator
Function regulation of forespore gene expression
Gene expression levels in SubtiExpress: spoVT
Metabolic function and regulation of this protein in SubtiPathways:
Lys, Thr, Stress
MW, pI 19 kDa, 4.676
Gene length, protein length 534 bp, 178 aa
Immediate neighbours mfd, yabM
Sequences Protein DNA DNA_with_flanks
Genetic context
SpoVT context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
SpoVT expression.png




























Categories containing this gene/protein

transcription factors and their control, sporulation proteins

This gene is a member of the following regulons

SigF regulon, SigG regulon

The SpoVT regulon

The gene

Basic information

  • Locus tag: BSU00560

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): AbrB, Abh (only the N-terminal domains (aa 1 through 50) are conserved between SpoVT and the two paralogues)

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 2W1R (full-length), 2W1T (C-terminal domain)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation: expressed in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Additional publications: PubMed