Difference between revisions of "SpoIIIAF"
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|style="background:#ABCDEF;" align="center"|'''Function''' || activation of [[SigG]] | |style="background:#ABCDEF;" align="center"|'''Function''' || activation of [[SigG]] | ||
|- | |- | ||
| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU24380 spoIIIAF] |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 4.952 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 4.952 | ||
| Line 22: | Line 22: | ||
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoIIIAG]]'', ''[[spoIIIAE]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[spoIIIAG]]'', ''[[spoIIIAE]]'' | ||
|- | |- | ||
| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU24380 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU24380 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU24380 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:spoIIIAF_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:spoIIIAF_context.gif]] | ||
Revision as of 13:16, 13 May 2013
- Description: component of the SpoIIIA-SpoIIQ type III secretion system residing in the forespore membrane, required for SigG activation
| Gene name | spoIIIAF |
| Synonyms | |
| Essential | no |
| Product | component of a type III secretion system |
| Function | activation of SigG |
| Gene expression levels in SubtiExpress: spoIIIAF | |
| MW, pI | 23 kDa, 4.952 |
| Gene length, protein length | 618 bp, 206 aa |
| Immediate neighbours | spoIIIAG, spoIIIAE |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
protein secretion, sporulation proteins, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU24380
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
- membrane protein PubMed
Database entries
- Structure:
- UniProt: P49783
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Regulation: expressed during sporulation in the mother cell (SigE) PubMed, switched off by SpoIIID PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Thierry Doan, Cecile Morlot, Jeffrey Meisner, Monica Serrano, Adriano O Henriques, Charles P Moran, David Z Rudner
Novel secretion apparatus maintains spore integrity and developmental gene expression in Bacillus subtilis.
PLoS Genet: 2009, 5(7);e1000566
[PubMed:19609349]
[WorldCat.org]
[DOI]
(I p)
Amy H Camp, Richard Losick
A novel pathway of intercellular signalling in Bacillus subtilis involves a protein with similarity to a component of type III secretion channels.
Mol Microbiol: 2008, 69(2);402-17
[PubMed:18485064]
[WorldCat.org]
[DOI]
(I p)
N Illing, J Errington
The spoIIIA operon of Bacillus subtilis defines a new temporal class of mother-cell-specific sporulation genes under the control of the sigma E form of RNA polymerase.
Mol Microbiol: 1991, 5(8);1927-40
[PubMed:1766372]
[WorldCat.org]
[DOI]
(P p)
