Difference between revisions of "YqjM"

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ketones, may be involved in detoxification
 
ketones, may be involved in detoxification
 
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU23820 yqjM]
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23820 yqjM]
 
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|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 5.137   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 37 kDa, 5.137   
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqjN]]'', ''[[yqjL]]''
 
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqjN]]'', ''[[yqjL]]''
 
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|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14314&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
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|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23820 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23820 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23820 Advanced_DNA]
 
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|colspan="2" | '''Genetic context''' <br/> [[Image:yqjM_context.gif]]
 
|colspan="2" | '''Genetic context''' <br/> [[Image:yqjM_context.gif]]

Revision as of 13:13, 13 May 2013

  • Description: NADPH-dependent flavin oxidoreductase

Gene name yqjM
Synonyms
Essential no
Product NADPH-dependent flavin oxidoreductase
Function reduction of double bonds of nonsaturated aldehydes and

ketones, may be involved in detoxification

Gene expression levels in SubtiExpress: yqjM
MW, pI 37 kDa, 5.137
Gene length, protein length 1014 bp, 338 aa
Immediate neighbours yqjN, yqjL
Sequences Protein DNA Advanced_DNA
Genetic context
YqjM context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqjM expression.png




























Categories containing this gene/protein

electron transport/ other, resistance against oxidative and electrophile stress

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU23820

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity: NADPH + acceptor = NADP+ + reduced acceptor (according to Swiss-Prot)
  • Protein family: NamA subfamily (according to Swiss-Prot)
  • Paralogous protein(s): YqiG

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure: 1Z41 (oxidized form), 1Z48 (reduced form)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: yqjM (according to DBTBS)
  • Sigma factor:
  • Regulation:
    • induced in the presence of H(2)O(2) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References