Difference between revisions of "CpgA"
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|style="background:#ABCDEF;" align="center"|'''Function''' || ribosome assembly, coordination of peptidoglycan deposition in the cell wall | |style="background:#ABCDEF;" align="center"|'''Function''' || ribosome assembly, coordination of peptidoglycan deposition in the cell wall | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU15780 cpgA] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/carbon_flow.html Central C-metabolism]''' | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[prkC]]'', ''[[rpe]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[prkC]]'', ''[[rpe]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU15780 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU15780 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU15780 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:yloQ_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:yloQ_context.gif]] | ||
Revision as of 12:48, 13 May 2013
- Description: GTPase, activity stimulated by ribosomes, may be involved in ribosome maturation
| Gene name | cpgA |
| Synonyms | yloQ |
| Essential | no |
| Product | GTPase |
| Function | ribosome assembly, coordination of peptidoglycan deposition in the cell wall |
| Gene expression levels in SubtiExpress: cpgA | |
| Metabolic function and regulation of this protein in SubtiPathways: Central C-metabolism | |
| MW, pI | 33 kDa, 4.743 |
| Gene length, protein length | 894 bp, 298 aa |
| Immediate neighbours | prkC, rpe |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
cell wall/ other, translation, GTP-binding proteins, phosphoproteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU15780
Phenotypes of a mutant
- forms curly cells PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: engC GTPase domain (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- binds the 30S subunit of the ribosome PubMed
Database entries
- Structure: 1T9H
- UniProt: O34530
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Tony Wilkinson, York University, U.K. homepage
Your additional remarks
References
Reviews
Robert A Britton
Role of GTPases in bacterial ribosome assembly.
Annu Rev Microbiol: 2009, 63;155-76
[PubMed:19575570]
[WorldCat.org]
[DOI]
(I p)
Original publications
