Difference between revisions of "SpoVT"
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|style="background:#ABCDEF;" align="center"|'''Function''' || regulation of forespore gene expression | |style="background:#ABCDEF;" align="center"|'''Function''' || regulation of forespore gene expression | ||
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| − | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http:// | + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU00560 spoVT] |
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|colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/lys_threo.html Lys, Thr], [http://subtiwiki.uni-goettingen.de/pathways/stress_response.html Stress]''' | |colspan="2" style="background:#FAF8CC;" align="center"| '''Metabolic function and regulation of this protein in [[SubtiPathways|''Subti''Pathways]]: <br/>[http://subtiwiki.uni-goettingen.de/pathways/lys_threo.html Lys, Thr], [http://subtiwiki.uni-goettingen.de/pathways/stress_response.html Stress]''' | ||
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|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mfd]]'', ''[[yabM]]'' | |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[mfd]]'', ''[[yabM]]'' | ||
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| − | | | + | |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU00560 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU00560 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU00560 Advanced_DNA] |
|- | |- | ||
|colspan="2" | '''Genetic context''' <br/> [[Image:spoVT_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:spoVT_context.gif]] | ||
Revision as of 11:55, 13 May 2013
- Description: transcription activator and repressor of SigG-dependent genes
| Gene name | spoVT |
| Synonyms | yabL |
| Essential | no |
| Product | transcriptional regulator |
| Function | regulation of forespore gene expression |
| Gene expression levels in SubtiExpress: spoVT | |
| Metabolic function and regulation of this protein in SubtiPathways: Lys, Thr, Stress | |
| MW, pI | 19 kDa, 4.676 |
| Gene length, protein length | 534 bp, 178 aa |
| Immediate neighbours | mfd, yabM |
| Sequences | Protein DNA Advanced_DNA |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
transcription factors and their control, sporulation proteins
This gene is a member of the following regulons
The SpoVT regulon
The gene
Basic information
- Locus tag: BSU00560
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): AbrB, Abh (only the N-terminal domains (aa 1 through 50) are conserved between SpoVT and the two paralogues)
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: Cytoplasm (Homogeneous) PubMed
Database entries
- UniProt: P37554
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoVT PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Additional publications: PubMed
