Difference between revisions of "AdhB"

From SubtiWiki
Jump to: navigation, search
Line 13: Line 13:
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown  
 
|style="background:#ABCDEF;" align="center"|'''Function''' || unknown  
 +
|-
 +
|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU26970 adhB]
 
|-
 
|-
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 5.659   
 
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 41 kDa, 5.659   

Revision as of 14:14, 7 August 2012

  • Description: forespore-specific protein, similar to alcohol dehydrogenase

Gene name adhB
Synonyms
Essential no
Product unknown
Function unknown
Gene expression levels in SubtiExpress: adhB
MW, pI 41 kDa, 5.659
Gene length, protein length 1134 bp, 378 aa
Immediate neighbours yraF, yraE
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
AdhB context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
AdhB expression.png
























Categories containing this gene/protein

sporulation proteins, poorly characterized/ putative enzymes

This gene is a member of the following regulons

SigG regulon

The gene

Basic information

  • Locus tag: BSU26970

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: Class-III subfamily (according to Swiss-Prot)
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

The gene is annotated in KEGG as alcohol dehydrogenase EC 1.1.1.284. It is annotated in Swiss-Prot as “NAD alcohol dehydrogenase”. It is marked as “alcohol dehydrogenase” in MetaCyc. No literature/experimental evidence supporting the annotation is available. PubMed

Expression and regulation

  • Regulation:
    • expressed during sporulation in the forespore (SigG) PubMed
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References