Difference between revisions of "YidC2"

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m (moved YqjG to YidC2: 22864117)
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=== Additional information===
 
=== Additional information===
 
 
  
  
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* '''Effectors of protein activity:'''
 
* '''Effectors of protein activity:'''
  
* '''Interactions:'''
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* '''[[SubtInteract|Interactions]]:'''
  
* '''Localization:''' membrane (according to Swiss-Prot)
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* '''[[Localization]]:'''  
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** membrane {{PubMed|22864117}}
  
 
=== Database entries ===
 
=== Database entries ===
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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:''' ''yqjG'' (according to [http://dbtbs.hgc.jp/COG/prom/yqjG.html DBTBS])
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* '''Operon:''' ''[[mifM]]-[[yidC2]]'' {{PubMed|22383849}}
  
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=oxaAB_2483904_2484731_1 yqjG] {{PubMed|22383849}}
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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=oxaAB_2483904_2484731_1 yidC2] {{PubMed|22383849}}
  
 
* '''Sigma factor:'''  
 
* '''Sigma factor:'''  
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=References=
 
=References=
  
<pubmed>17114254, 15995216, 11889108, 12586834 19717609 19779460 21204254 </pubmed>
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<pubmed>17114254, 15995216, 11889108, 12586834 19717609 19779460 21204254 22383849 22864117 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 11:36, 7 August 2012

  • Description: Sec-independent membrane protein translocase

Gene name yqjG
Synonyms oxaAB
Essential no
Product Sec-independent membrane protein translocase
Function membrane insertion of proteins and protein secretion
MW, pI 30 kDa, 9.903
Gene length, protein length 825 bp, 275 aa
Immediate neighbours mifM, yqjF
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YqjG context.gif
This image was kindly provided by SubtiList
Expression at a glance   PubMed
YqjG expression.png















Categories containing this gene/protein

protein secretion, membrane proteins

This gene is a member of the following regulons

MifM regulon

The gene

Basic information

  • Locus tag: BSU23890

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family: Type 2 subfamily (according to Swiss-Prot)
  • Paralogous protein(s): SpoIIIJ, one of the two proteins has to be present for viability PubMed

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulatory mechanism:
    • MifM: "attenuation mechanism", an mRNA hairpin of the yqjG transcript unfold upon translation arrest of MifM at decreased SpoIIIJ levels PubMed
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References