Difference between revisions of "Alr"
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|colspan="2" | '''Genetic context''' <br/> [[Image:alr_context.gif]] | |colspan="2" | '''Genetic context''' <br/> [[Image:alr_context.gif]] | ||
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div> | ||
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| + | |colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=alrA_517372_518541_1 Expression at a glance]'''   {{PubMed|22383849}}<br/>[[Image:alr_expression.png|500px]] | ||
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Revision as of 14:43, 18 April 2012
- Description: alanine racemase
| Gene name | alr |
| Synonyms | dal, alrA |
| Essential | yes PubMed |
| Product | alanine racemase |
| Function | peptidoglycan biosynthesis |
| MW, pI | 43 kDa, 8.431 |
| Gene length, protein length | 1167 bp, 389 aa |
| Immediate neighbours | ydcC, ndoAI |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Expression at a glance PubMed
| |
Contents
Categories containing this gene/protein
cell wall synthesis, biosynthesis of cell wall components, essential genes
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU04640
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: L-alanine = D-alanine (according to Swiss-Prot)
- Protein family: alanine racemase family (according to Swiss-Prot)
- Paralogous protein(s): YncD
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
Database entries
- Structure: 1L6G (with N-[5�-phosphopyridoxyl]-D-alanine, Geobacillus stearothermophilus), 1SFT (Geobacillus stearothermophilus)
- UniProt: P10725
- KEGG entry: [2]
- E.C. number: 5.1.1.1
Additional information
Expression and regulation
- Operon:
- Sigma factor:
- Regulation:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
