Difference between revisions of "YxdJ"

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* '''Operon:''' ''[[yxdJ]]-[[yxdK]]''  [http://www.ncbi.nlm.nih.gov/sites/entrez/10746760 PubMed]
 
* '''Operon:''' ''[[yxdJ]]-[[yxdK]]''  [http://www.ncbi.nlm.nih.gov/sites/entrez/10746760 PubMed]
  
* '''[[Sigma factor]]:'''  
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yxdJ_4072284_4072973_-1 yxdJ] {{PubMed|22383849}}
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* '''Sigma factor:'''  
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  

Revision as of 10:03, 17 April 2012

Gene name yxdJ
Synonyms
Essential no
Product two-component response regulator
Function resistance against toxic peptides
Interactions involving this protein in SubtInteract: YxdJ
MW, pI 26 kDa, 4.937
Gene length, protein length 687 bp, 229 aa
Immediate neighbours yxdK, iolJ
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YxdJ context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

transcription factors and their control, resistance against toxins/ antibiotics, phosphoproteins

This gene is a member of the following regulons

The YxdJ regulon:

The gene

Basic information

  • Locus tag: BSU39660

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated by YxdK on an Asp residue
  • Cofactor(s):
  • Effectors of protein activity:
  • Localization: cytoplasm (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Sigma factor:
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References