Difference between revisions of "OpuCD"
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* '''Operon:''' ''[[opuCA]]-[[opuCB]]-[[opuCC]]-[[opuCD]]'' {{PubMed|10216873}} | * '''Operon:''' ''[[opuCA]]-[[opuCB]]-[[opuCC]]-[[opuCD]]'' {{PubMed|10216873}} | ||
| − | * '''[ | + | * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=opuCD_3467546_3468235_-1 opuCD] {{PubMed|22383849}} |
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| + | * '''Sigma factor:''' | ||
* '''Regulation:''' | * '''Regulation:''' | ||
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* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 06:41, 17 April 2012
- Description: glycine betaine/carnitine/choline ABC transporter
| Gene name | opuCD |
| Synonyms | yvbB |
| Essential | no |
| Product | glycine betaine/carnitine/choline ABC transporter |
| Function | compatible solute transport |
| Interactions involving this protein in SubtInteract: OpuCD | |
| Metabolic function and regulation of this protein in SubtiPathways: Stress | |
| MW, pI | 24 kDa, 10.149 |
| Gene length, protein length | 687 bp, 229 aa |
| Immediate neighbours | sdpR, opuCC |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
Categories containing this gene/protein
ABC transporters, coping with hyper-osmotic stress, membrane proteins
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU33800
Phenotypes of a mutant
Database entries
- DBTBS entry: no entry
- SubtiList entry: [1]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: CysTW subfamily (according to Swiss-Prot)
- Paralogous protein(s): OpuBD
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization: cell membrane PubMed
Database entries
- Structure:
- UniProt: O34742
- KEGG entry: [2]
- E.C. number:
Additional information
Expression and regulation
- Sigma factor:
- Regulation:
- induced by salt stress PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
