Difference between revisions of "CspD"

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* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=cspD_2307905_2308105_1 cspD] {{PubMed|22383849}}
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Revision as of 08:38, 16 April 2012

  • Description: cold shock protein

Gene name cspD
Synonyms
Essential no
Product cold shock protein
Function RNA chaperone
MW, pI 7 kDa, 4.31
Gene length, protein length 198 bp, 66 aa
Immediate neighbours ugtP, degR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
CspD context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

RNA chaperones, cold stress proteins

This gene is a member of the following regulons

The gene

Basic information

  • Locus tag: BSU21930

Phenotypes of a mutant

Database entries

  • DBTBS entry: no entry
  • SubtiList entry: [1]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:

Database entries

  • Structure:
  • KEGG entry: [2]
  • E.C. number:

Additional information

  • subject to Clp-dependent proteolysis upon glucose starvation PubMed

Expression and regulation

  • Operon:
  • Sigma factor:
  • Regulation:
    • weakly induced by cold shock PubMed
  • Regulatory mechanism:
  • Additional information: subject to Clp-dependent proteolysis upon glucose starvation PubMed

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system: B. pertussis adenylate cyclase-based bacterial two hybrid system (BACTH), available in Stülke lab
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References

Reviews

Original publications