Difference between revisions of "YdcC"

From SubtiWiki
Jump to: navigation, search
m (Reverted edits by 134.76.70.252 (talk) to last revision by Lflorez)
Line 101: Line 101:
 
* '''Operon:''' ''ydcC'' (according to [http://dbtbs.hgc.jp/COG/prom/ydcC.html DBTBS])
 
* '''Operon:''' ''ydcC'' (according to [http://dbtbs.hgc.jp/COG/prom/ydcC.html DBTBS])
  
* '''[[Sigma factor]]:''' [[SigE]] {{PubMed|15699190,12662922}}
+
* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ydcC_516241_517257_1 ydcC] {{PubMed|22383849}}
 +
 
 +
* '''Sigma factor:''' [[SigE]] {{PubMed|15699190,12662922}}
  
 
* '''Regulation:'''  
 
* '''Regulation:'''  
Line 107: Line 109:
 
* '''Regulatory mechanism:'''  
 
* '''Regulatory mechanism:'''  
  
* '''Additional information:'''  
+
* '''Additional information:'''
  
 
=Biological materials =
 
=Biological materials =

Revision as of 14:44, 12 April 2012

  • Description: unknown

Gene name ydcC
Synonyms
Essential no
Product unknown
Function unknown
MW, pI 42 kDa, 9.596
Gene length, protein length 1119 bp, 373 aa
Immediate neighbours acpS, alr
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
YdcC context.gif
This image was kindly provided by SubtiList



Categories containing this gene/protein

sporulation proteins, membrane proteins

This gene is a member of the following regulons

SigE regulon

The gene

Basic information

  • Locus tag: BSU04630

Phenotypes of a mutant

defect in sporulation PubMed

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s):

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification: phosphorylated on Thr-197 and Thr-201 PubMed
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization: cell membrane (according to Swiss-Prot)

Database entries

  • Structure:
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Operon: ydcC (according to DBTBS)
  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References