Difference between revisions of "RpmE"
| Line 12: | Line 12: | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] L31 | |style="background:#ABCDEF;" align="center"| '''Product''' || [[ribosomal protein]] L31 | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || translation | + | |style="background:#ABCDEF;" align="center"|'''Function''' || [[translation]] |
| + | |- | ||
| + | |colspan="2" style="background:#FAF8CC;" align="center"| '''Interactions involving this protein in [http://cellpublisher.gobics.de/subtinteract/startpage/start/ ''Subt''Interact]''': [http://cellpublisher.gobics.de/subtinteract/interactionList/2/RpmE RpmE] | ||
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 9.157 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 7 kDa, 9.157 | ||
| Line 81: | Line 83: | ||
* '''Effectors of protein activity:''' Zn(2+) {{PubMed|15049826}} | * '''Effectors of protein activity:''' Zn(2+) {{PubMed|15049826}} | ||
| − | * '''Interactions:''' | + | * '''[[SubtInteract|Interactions]]:''' |
| − | * '''Localization:''' | + | * '''[[Localization]]:''' |
=== Database entries === | === Database entries === | ||
Revision as of 11:36, 23 July 2011
- Description: ribosomal protein
| Gene name | rpmE |
| Synonyms | |
| Essential | yes PubMed |
| Product | ribosomal protein L31 |
| Function | translation |
| Interactions involving this protein in SubtInteract: RpmE | |
| MW, pI | 7 kDa, 9.157 |
| Gene length, protein length | 198 bp, 66 aa |
| Immediate neighbours | tdk, rho |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
Categories containing this gene/protein
This gene is a member of the following regulons
The gene
Basic information
- Locus tag: BSU37070
Phenotypes of a mutant
essential PubMed
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: Type A subfamily (according to Swiss-Prot)
- Paralogous protein(s): YtiA
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity: Zn(2+) PubMed
Database entries
- Structure:
- UniProt: Q03223
- KEGG entry: [3]
- E.C. number:
Additional information
Under conditions of zinc starvation, RpmE is replaced by its paralog YtiA, that does not require zinc PubMed
Expression and regulation
- Operon: rpmE PubMed
- Sigma factor:
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
