Difference between revisions of "ScoB"
| Line 87: | Line 87: | ||
=Expression and regulation= | =Expression and regulation= | ||
| + | * '''Operon:''' ''[[yxjC]]-[[scoA]]-[[scoB]]-[[yxjF]]'' {{PubMed|10746760}} | ||
| − | + | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed|12662922}} | |
| − | |||
| − | * '''[[Sigma factor]]:''' [[SigE]] {{PubMed| | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** repressed by glucose ([[CcpA]]) {{PubMed|12850135,10666464}} | ||
| + | ** expressed early during sporulation in the mother cell ([[SigE]]) {{PubMed|12662922}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[CcpA]]: transcription repression {{PubMed|12850135,10666464}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 118: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed>17363272,,16672620,, </pubmed> | + | <pubmed>17363272,10746760,16672620,12662922,12850135,10666464 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 10:33, 7 February 2010
- Description: probable succinyl CoA:3-oxoacid CoA-transferase (subunit B)
| Gene name | scoB |
| Synonyms | yxjE |
| Essential | no |
| Product | probable succinyl CoA:3-oxoacid CoA-transferase (subunit B) |
| Function | lipid metabolism |
| MW, pI | 23 kDa, 4.893 |
| Gene length, protein length | 648 bp, 216 aa |
| Immediate neighbours | yxjF, scoA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU38980
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity: Succinyl-CoA + a 3-oxo acid = succinate + a 3-oxoacyl-CoA (according to Swiss-Prot)
- Protein family: 3-oxoacid CoA-transferase subunit B family (according to Swiss-Prot)
- Paralogous protein(s): YodR
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P42316
- KEGG entry: [3]
- E.C. number: 2.8.3.5
Additional information
Expression and regulation
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
