Difference between revisions of "AmyX"

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=Expression and regulation=
 
=Expression and regulation=
  
* '''Operon:'''  
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* '''Operon:''' ''[[amyX]]'' {{PubMed|9387221}}
  
 
* '''[[Sigma factor]]:'''  
 
* '''[[Sigma factor]]:'''  
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=References=
 
=References=
  
<pubmed>16582490,,19465663 </pubmed>
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<pubmed>16582490,9387221 ,19465663 </pubmed>
  
 
[[Category:Protein-coding genes]]
 
[[Category:Protein-coding genes]]

Revision as of 18:40, 19 December 2009

  • Description: pullulanase (debranching enzyme)

Gene name amyX
Synonyms
Essential no
Product pullulanase
Function starch degradation
MW, pI 80 kDa, 5.799
Gene length, protein length 2154 bp, 718 aa
Immediate neighbours ytmP, ytlR
Get the DNA and protein sequences
(Barbe et al., 2009)
Genetic context
AmyX context.gif
This image was kindly provided by SubtiList



The gene

Basic information

  • Locus tag: BSU29930

Phenotypes of a mutant

Database entries

  • DBTBS entry: [1]
  • SubtiList entry: [2]

Additional information

The protein

Basic information/ Evolution

  • Catalyzed reaction/ biological activity:
  • Protein family:
  • Paralogous protein(s): GlgB

Extended information on the protein

  • Kinetic information:
  • Domains:
  • Modification:
  • Cofactor(s):
  • Effectors of protein activity:
  • Interactions:
  • Localization:

Database entries

  • Structure: 2E8Z (complex with alpha cyclodextrin), 2E9B (complex with maltose)
  • KEGG entry: [3]
  • E.C. number:

Additional information

Expression and regulation

  • Regulation:
  • Regulatory mechanism:
  • Additional information:

Biological materials

  • Mutant:
  • Expression vector:
  • lacZ fusion:
  • GFP fusion:
  • two-hybrid system:
  • Antibody:

Labs working on this gene/protein

Your additional remarks

References