Difference between revisions of "GerE"
| Line 94: | Line 94: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''gerE'' {{PubMed|3114423}} |
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}} | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| + | ** expressed late during sporulation in the mother cell ([[SigK]], [[SpoIIID]]) {{PubMed|15699190,7896717}} | ||
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| + | ** [[SpoIIID]]: transcription activation {{PubMed|7896717}} | ||
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 127: | Line 129: | ||
=References= | =References= | ||
| − | <pubmed>7519271,2474075,11418558,10400595,7592393,11741866,7592342,3135411,9852018,1691789,15383836,11150673,1518043,7814326,14523132,12031481,11418558, </pubmed> | + | <pubmed>7519271,2474075,11418558,10400595,7592393,11741866,7592342,3135411,9852018,1691789,15383836,11150673,1518043,7814326,14523132,12031481,11418558, 3114423 7896717 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 20:45, 13 December 2009
- Description: transcriptional regulator required for the expression of SigK-dependent late spore coat genes
| Gene name | gerE |
| Synonyms | |
| Essential | no |
| Product | transcriptional regulator (LuxR-FixJ family) |
| Function | regulation of SigK-dependent gene expression |
| MW, pI | 8 kDa, 9.635 |
| Gene length, protein length | 222 bp, 74 aa |
| Immediate neighbours | ysmB, ysmA |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU28410
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LuxR-FixJ family of transcription regulators
- Paralogous protein(s):
Genes controlled by GerE
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure: 1FSE
- UniProt: P11470
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: gerE PubMed
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
- Arthur Aronson, Purdue University, West Lafayette, USA homepage
- Charles Moran, Emory University, NC, USA homepage
Your additional remarks
References
