Difference between revisions of "CotD"
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''cotD'' (according to [http://dbtbs.hgc.jp/COG/prom/cotD.html DBTBS]) |
* '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}} | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|15699190}} | ||
* '''Regulation:''' | * '''Regulation:''' | ||
| − | ** | + | ** expressed late during sporulation in the mother cell ([[SigK]], [[SpoIIID]]) {{PubMed|15699190,7966271}} |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| − | ** [[ | + | ** [[SpoIIID]]: transcription repression {{PubMed|7966271}} |
* '''Additional information:''' | * '''Additional information:''' | ||
| Line 120: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed>,1518043,2821284,2492118,1691789,14651647, </pubmed> | + | <pubmed>,1518043,2821284,2492118,1691789,14651647, 15699190,7966271</pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 20:44, 26 October 2009
- Description: spore coat protein (inner)
| Gene name | cotD |
| Synonyms | |
| Essential | no |
| Product | spore coat protein (inner) |
| Function | resistance of the spore |
| MW, pI | 8 kDa, 7.373 |
| Gene length, protein length | 225 bp, 75 aa |
| Immediate neighbours | ypsA, yprB |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU22200
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: nhaC Na(+)/H(+) antiporter family (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization:
Database entries
- Structure:
- UniProt: P07791
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: cotD (according to DBTBS)
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
