Difference between revisions of "ScoC"
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| − | * '''Description:''' transcriptional repressor of | + | * '''Description:''' transcriptional repressor of genes expressed in the transition phase<br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
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|style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional repressor (MarR family) | |style="background:#ABCDEF;" align="center"| '''Product''' || transcriptional repressor (MarR family) | ||
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| − | |style="background:#ABCDEF;" align="center"|'''Function''' || | + | |style="background:#ABCDEF;" align="center"|'''Function''' || transition state regulator |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 5.188 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 23 kDa, 5.188 | ||
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* '''Paralogous protein(s):''' | * '''Paralogous protein(s):''' | ||
| + | |||
| + | === Genes controlled by ScoC=== | ||
| + | repressed: ''[[aprE]]'', ''[[hag]]'', ''[[flgM]]'', | ||
=== Extended information on the protein === | === Extended information on the protein === | ||
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=References= | =References= | ||
| − | <pubmed>3131303,16923912,1906467,10383984,16321961,14629015,1907636,15126467,2504584, 15104138, 19118355 </pubmed> | + | <pubmed>3131303,16923912,1906467,10383984,16321961,14629015,1907636,15126467,2504584, 15104138, 19118355 19801406 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 05:28, 7 October 2009
- Description: transcriptional repressor of genes expressed in the transition phase
| Gene name | scoC |
| Synonyms | hpr, catA |
| Essential | no |
| Product | transcriptional repressor (MarR family) |
| Function | transition state regulator |
| MW, pI | 23 kDa, 5.188 |
| Gene length, protein length | 609 bp, 203 aa |
| Immediate neighbours | yhaI, yhaH |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU09990
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Genes controlled by ScoC
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Localization:
Database entries
- Structure: 2FXA
- UniProt: P11065
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: scoC PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant: TMB081(tet), available in the Thorsten Mascher lab
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
