Difference between revisions of "YknW"
| Line 12: | Line 12: | ||
|style="background:#ABCDEF;" align="center"| '''Product''' || ABC-type antimicrobial peptide transporter (permease) | |style="background:#ABCDEF;" align="center"| '''Product''' || ABC-type antimicrobial peptide transporter (permease) | ||
|- | |- | ||
| − | |style="background:#ABCDEF;" align="center"|'''Function''' || resistence against SdpC toxin | + | |style="background:#ABCDEF;" align="center"|'''Function''' || resistence against [[SdpC]] toxin |
|- | |- | ||
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 24 kDa, 6.94 | |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 24 kDa, 6.94 | ||
| Line 88: | Line 88: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''[[yknW]]-[[yknX]]-[[yknY]]-[[yknZ]]'' {{PubMed|9987136}} |
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' [[SigW]] {{PubMed|9987136}} |
* '''Regulation:''' | * '''Regulation:''' | ||
| Line 120: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed>16629676,,12076816,18763711, </pubmed> | + | <pubmed>16629676,,12076816,18763711, 9987136 </pubmed> |
[[Category:Protein-coding genes]] | [[Category:Protein-coding genes]] | ||
Revision as of 20:54, 5 October 2009
- Description: ABC-type antimicrobial peptide transporter (permease)
| Gene name | yknW |
| Synonyms | |
| Essential | no |
| Product | ABC-type antimicrobial peptide transporter (permease) |
| Function | resistence against SdpC toxin |
| MW, pI | 24 kDa, 6.94 |
| Gene length, protein length | 693 bp, 231 aa |
| Immediate neighbours | yknV, yknX |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU14340
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: cell membrane (according to Swiss-Prot), membrane PubMed
Database entries
- Structure:
- UniProt: O31709
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
Hannes Hahne, Susanne Wolff, Michael Hecker, Dörte Becher
From complementarity to comprehensiveness--targeting the membrane proteome of growing Bacillus subtilis by divergent approaches.
Proteomics: 2008, 8(19);4123-36
[PubMed:18763711]
[WorldCat.org]
[DOI]
(I p)
Bronwyn G Butcher, John D Helmann
Identification of Bacillus subtilis sigma-dependent genes that provide intrinsic resistance to antimicrobial compounds produced by Bacilli.
Mol Microbiol: 2006, 60(3);765-82
[PubMed:16629676]
[WorldCat.org]
[DOI]
(P p)
Qiang Qian, Chien Y Lee, John D Helmann, Mark A Strauch
AbrB is a regulator of the sigma(W) regulon in Bacillus subtilis.
FEMS Microbiol Lett: 2002, 211(2);219-23
[PubMed:12076816]
[WorldCat.org]
[DOI]
(P p)
X Huang, A Gaballa, M Cao, J D Helmann
Identification of target promoters for the Bacillus subtilis extracytoplasmic function sigma factor, sigma W.
Mol Microbiol: 1999, 31(1);361-71
[PubMed:9987136]
[WorldCat.org]
[DOI]
(P p)
