Difference between revisions of "Ldt"
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=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' | + | * '''Operon:''' ''ldt'' {{PubMed|11011148}} |
| − | * '''[[Sigma factor]]:''' | + | * '''[[Sigma factor]]:''' [[SigK]] {{PubMed|11011148}} |
| − | * '''Regulation:''' repressed by glucose (3.3-fold) ([[CcpA]]) [ | + | * '''Regulation:''' |
| + | ** repressed by glucose (3.3-fold) ([[CcpA]]) {{PubMed|12850135}} | ||
| + | ** expressed during sporulation in the mother cell ([[SigK]]) {{PubMed|11011148}} | ||
| − | * '''Regulatory mechanism:''' [[CcpA]]: transcription repression | + | * '''Regulatory mechanism:''' [[CcpA]]: transcription repression {{PubMed|12850135}} |
| − | * '''Additional information:''' | + | * '''Additional information:''' |
=Biological materials = | =Biological materials = | ||
Revision as of 20:21, 5 October 2009
- Description: L,D-transpeptidase involved in cell wall synthesis
| Gene name | ldt |
| Synonyms | ykuD |
| Essential | no |
| Product | L,D-transpeptidase |
| Function | cell wall biosynthesis |
| MW, pI | 17 kDa, 10.252 |
| Gene length, protein length | 492 bp, 164 aa |
| Immediate neighbours | ykuC, ykuE |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
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Contents
The gene
Basic information
- Locus tag: BSU14040
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family: LysM repeat (according to Swiss-Prot)
- Paralogous protein(s):
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: spore wall (according to Swiss-Prot)
Database entries
- Structure: 1Y7M
- UniProt: O34816
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: ldt PubMed
- Regulation:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
