Difference between revisions of "SpoVT"
(→Expression and regulation) |
|||
| Line 1: | Line 1: | ||
| − | * '''Description:''' transcription activator and repressor of SigG-dependent genes <br/><br/> | + | * '''Description:''' transcription activator and repressor of [[SigG]]-dependent genes <br/><br/> |
{| align="right" border="1" cellpadding="2" | {| align="right" border="1" cellpadding="2" | ||
| Line 90: | Line 90: | ||
=Expression and regulation= | =Expression and regulation= | ||
| − | * '''Operon:''' ''spoVT'' | + | * '''Operon:''' ''spoVT'' [http://www.ncbi.nlm.nih.gov/sites/entrez/8755877 PubMed] |
| − | * '''[[Sigma factor]]:''' [[SigG]] | + | * '''[[Sigma factor]]:''' [[SigG]] [http://www.ncbi.nlm.nih.gov/sites/entrez/8755877 PubMed] |
| − | * '''Regulation:''' | + | * '''Regulation:''' expressed in the forespore ([[SigG]]) [http://www.ncbi.nlm.nih.gov/sites/entrez/8755877 PubMed] |
* '''Regulatory mechanism:''' | * '''Regulatory mechanism:''' | ||
| Line 120: | Line 120: | ||
=References= | =References= | ||
| − | <pubmed>16497325,18996130,15063493,, 16479537, 16159768 </pubmed> | + | <pubmed>16497325,18996130,15063493,8755877 , 16479537, 16159768 </pubmed> |
Revision as of 19:31, 4 July 2009
- Description: transcription activator and repressor of SigG-dependent genes
| Gene name | spoVT |
| Synonyms | yabL |
| Essential | no |
| Product | transcriptional regulator |
| Function | regulation of forespore gene expression |
| Metabolic function and regulation of this protein in SubtiPathways: Lys, Thr, Stress | |
| MW, pI | 19 kDa, 4.676 |
| Gene length, protein length | 534 bp, 178 aa |
| Immediate neighbours | mfd, yabM |
| Get the DNA and protein sequences (Barbe et al., 2009) | |
Genetic context 
This image was kindly provided by SubtiList
| |
Contents
The gene
Basic information
- Locus tag: BSU00560
Phenotypes of a mutant
Database entries
- DBTBS entry: [1]
- SubtiList entry: [2]
Additional information
The protein
Basic information/ Evolution
- Catalyzed reaction/ biological activity:
- Protein family:
- Paralogous protein(s): AbrB, Abh (only the N-terminal domains (aa 1 through 50) are conserved between SpoVT and the two paralogues)
Extended information on the protein
- Kinetic information:
- Domains:
- Modification:
- Cofactor(s):
- Effectors of protein activity:
- Interactions:
- Localization: Cytoplasm (Homogeneous) PubMed
Database entries
- Swiss prot entry: P37554
- KEGG entry: [3]
- E.C. number:
Additional information
Expression and regulation
- Operon: spoVT PubMed
- Regulatory mechanism:
- Additional information:
Biological materials
- Mutant:
- Expression vector:
- lacZ fusion:
- GFP fusion:
- two-hybrid system:
- Antibody:
Labs working on this gene/protein
Your additional remarks
References
