YezB - Revision history

134.76.70.252 at 12:44, 16 May 2013

2013-05-16T12:44:47Z

134.76.70.252 at 12:19, 13 May 2013

2013-05-13T12:19:56Z

Raphael2215 at 09:21, 13 August 2012

2012-08-13T09:21:17Z

134.76.70.252 at 15:49, 6 August 2012

2012-08-06T15:49:31Z

134.76.70.252 at 15:44, 18 April 2012

2012-04-18T15:44:25Z

134.76.70.252 at 15:52, 12 April 2012

2012-04-12T15:52:00Z

Umaeder at 12:28, 28 March 2012

2012-03-28T12:28:43Z

Jstuelk: Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk

2012-01-27T20:29:19Z

Reverted edits by 134.76.70.252 (talk) to last revision by Jstuelk

134.76.70.252 at 14:51, 24 January 2012

2012-01-24T14:51:03Z

Jstuelk: /* Extended information on the protein */

2011-08-10T16:01:22Z

‎Extended information on the protein

← Older revision		Revision as of 12:44, 16 May 2013
Line 1:		Line 1:
−	* '''Description:''' split paralog of [[RsbR]] (with [[YetI]]) <br/><br/>	+	{{#bank: YezB}}
−	{~~\| align="right" border="1" cellpadding="2"~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\|'''Gene name'''~~
−	~~\|''yezB''~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Synonyms''' \|\| '' ''~~
−	\|-
−	~~\|style="background:~~#~~ABCDEF;" align="center"\| '''Essential''' \|\| no~~
−	\|-
−	~~\|style="background~~:~~#ABCDEF;" align="center"\| '''Product''' \|\| split paralog of [[RsbR]] (with [[YetI]])~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\|'''Function''' \|\| possible stressosome protein~~
−	\|-
−	\|colspan="2" style="background:#FAF8CC;" align="center"\| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07180 yezB]
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''MW, pI''' \|\| - , -~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\| '''Gene length, protein length''' \|\| 297 bp, -~~
−	\|-
−	~~\|style="background:#ABCDEF;" align="center"\|'''Immediate neighbours''' \|\| ''[[yetI]]'', ''[[yezD]]''~~
−	\|-
−	~~\|style="background:#FAF8CC;" align="center"\|'''[http://subtiwiki.uni-goettingen.de/yezB_nucleotide.txt Gene sequence (+200bp) ]'''~~
−	~~\|style="background:#FAF8CC;" align="center"\|'''[http://subtiwiki.uni-goettingen.de/yezB_protein.txt Protein sequence]'''~~
−	\|-
−	~~\|colspan="2" \| '''Genetic context''' <br/> [[Image:yezB_context.gif]]~~
−	~~<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>~~
−	\|-
−	~~\|colspan="2" \|'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yetI_787264_787560_1 Expression at a glance]'''   {{PubMed\|22383849}~~}~~<br/>[[Image:yezB_expression.png\|500px]]~~
−	\|-
−	\|}

−	~~__TOC__~~
−	~~<br/><br/><br/><br/>~~
−	~~<br/><br/><br/><br/>~~
−	~~<br/><br/><br/><br/>~~
−	~~<br/><br/><br/><br/>~~
−	~~<br/><br/><br/><br/>~~
−
−
−	~~<br/><br/>~~
−
−	~~= [[Categories]] containing this gene/protein =~~
−	~~{{SubtiWiki category\|[[sigma factors and their control]]}},~~
−	~~{{SubtiWiki category\|[[phosphoproteins]]}},~~
−	~~{{SubtiWiki category\|[[pseudogenes]]}}~~
−
−	~~= This gene is a member of the following [[regulons]] =~~
−
−
−	~~=The gene=~~
−
−	~~=== Basic information ===~~
−
−	* '''Locus tag:''' BSU07180
−
−	~~===Phenotypes of a mutant ===~~
−
−	~~=== Database entries ===~~
−
−	* '''DBTBS entry:''' no entry
−
−	* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG12873]
−
−	~~=== Additional information===~~
−
−
−
−
−	~~=The protein=~~
−
−	~~=== Basic information/ Evolution ===~~
−
−	* '''Catalyzed reaction/ biological activity:'''
−
−	* '''Protein family:'''
−
−	* '''Paralogous protein(s):'''
−
−	~~=== Extended information on the protein ===~~
−
−	* '''Kinetic information:'''
−
−	* '''Domains:'''
−
−	* '''Modification:''' phosphorylated on Ser/ Thr by [[PrkC]], dephosphorylated by [[PrpC]] [http://www.ncbi.nlm.nih.gov/sites/entrez/19246764 PubMed]
−
−	* '''Cofactor(s):'''
−
−	* '''Effectors of protein activity:'''
−
−	* '''[[SubtInteract\|Interactions]]:'''
−
−	* '''[[Localization]]:'''
−
−	~~=== Database entries ===~~
−
−	* '''Structure:'''
−
−	* '''Swiss prot entry:'''
−
−	* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU07180]
−
−	* '''E.C. number:'''
−
−	~~=== Additional information===~~
−
−	~~=Expression and regulation=~~
−
−	* '''Operon:'''
−
−	* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yetI_787264_787560_1 yezB] {{PubMed\|22383849}}
−
−	* '''Sigma factor:'''
−
−	* '''Regulation:'''
−
−	* '''Regulatory mechanism:'''
−
−	* '''Additional information:'''
−
−	~~=Biological materials =~~
−
−	* '''Mutant:'''
−
−	* '''Expression vector:'''
−
−	* '''lacZ fusion:'''
−
−	* '''GFP fusion:'''
−
−	* '''two-hybrid system:'''
−
−	* '''Antibody:'''
−
−	~~=Labs working on this gene/protein=~~
−
−	~~=Your additional remarks=~~
−
−	~~=References=~~
−
−	~~<pubmed>19246764,, 19246764 </pubmed>~~
−
−	~~[[Category:Protein-coding genes]]~~

@@ Line 13: / Line 13: @@
 |style="background:#ABCDEF;" align="center"|'''Function''' || possible stressosome protein
 |-
-|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU07180 yezB]
+|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU07180 yezB]
 |-
 |style="background:#ABCDEF;" align="center"| '''MW, pI''' || - , -

@@ Line 1: / Line 1: @@
+* '''Description:''' split paralog of [[RsbR]] (with [[YetI]]) <br/><br/>
 {| align="right" border="1" cellpadding="2"
 |-

@@ Line 1: / Line 1: @@
-* '''Description:''' split paralog of [[RsbR]] (with [[YetI]]) <br/><br/>
 {| align="right" border="1" cellpadding="2"
@@ Line 13: / Line 13: @@
 |-
 |style="background:#ABCDEF;" align="center"|'''Function''' || possible stressosome protein
 |-
 |style="background:#ABCDEF;" align="center"| '''MW, pI''' || - , -

@@ Line 25: / Line 25: @@
 |colspan="2" | '''Genetic context''' <br/> [[Image:yezB_context.gif]]
   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 |-
 |}
 __TOC__
 <br/><br/>

@@ Line 101: / Line 101: @@
 * '''Operon:'''
-* '''[[Sigma factor]]:'''
+* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yetI_787264_787560_1 yezB] {{PubMed|22383849}}
 * '''Regulation:'''
@@ Line 107: / Line 109: @@
 * '''Regulatory mechanism:'''
 * '''Additional information:'''
 =Biological materials =

@@ Line 14: / Line 14: @@
 |style="background:#ABCDEF;" align="center"|'''Function''' || possible stressosome protein
 |-
-|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 10 kDa, 4.621
+|style="background:#ABCDEF;" align="center"| '''MW, pI''' || - , -
 |-
-|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 282 bp, 94 aa
+|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 297 bp, -
 |-
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yetI]]'', ''[[yezD]]''

← Older revision		Revision as of 20:29, 27 January 2012
Line 45:		Line 45:

	* '''Locus tag:''' BSU07180		* '''Locus tag:''' BSU07180
−
−	~~[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yetI_787264_787560_1 Expression]~~

	===Phenotypes of a mutant ===		===Phenotypes of a mutant ===

← Older revision		Revision as of 14:51, 24 January 2012
Line 45:		Line 45:

	* '''Locus tag:''' BSU07180		* '''Locus tag:''' BSU07180
		+
		+	[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=yetI_787264_787560_1 Expression]

	===Phenotypes of a mutant ===		===Phenotypes of a mutant ===

@@ Line 81: / Line 81: @@
 * '''Effectors of protein activity:'''
-* '''Interactions:'''
+* '''[[SubtInteract|Interactions]]:'''
-* '''Localization:'''
+* '''[[Localization]]:'''
 === Database entries ===