http://subtiwiki.uni-goettingen.de/wiki//index.php?action=history&feed=atom&title=Targets_of_the_Y_complex 2026-04-11T08:28:02Z Revision history for this page on the wiki MediaWiki 1.30.0 http://subtiwiki.uni-goettingen.de/wiki//index.php?title=Targets_of_the_Y_complex&diff=209943&oldid=prev 2018-05-30T17:20:54Z

<p>Created page with &quot;= RNAs that require the Y complex for processing by <a href="/wiki//index.php/Rny" title="Rny">RNase Y</a>= === mRNAs directly cleaved by <a href="/wiki//index.php/Rny" title="Rny">RNase Y</a> === * processing of the &#039;&#039;<a href="/wiki//index.php/GapA" title="GapA">gapA</a>&#039;&#039; operon mRNA between &#039;...&quot;</p> <p><b>New page</b></p><div>= RNAs that require the Y complex for processing by [[rny|RNase Y]]=<br /> <br /> === mRNAs directly cleaved by [[rny|RNase Y]] ===<br /> <br /> * processing of the ''[[gapA]]'' operon mRNA between ''[[cggR]]'' and ''[[gapA]]'' (''[[cggR]]-[[gapA]]-[[pgk]]-[[tpi]]-[[pgm]]-[[eno]]''), requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222,19193632}} <br /> * processing of the ATPase operon mRNA between ''[[atpI]]'' and ''[[atpB]]'' (''[[atpI]]-[[atpB]]-[[atpE]]-[[atpF]]-[[atpH]]-[[atpA]]-[[atpG]]-[[atpD]]-[[atpC]]''), requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}} <br /> * processing of the ''[[dacA]]-[[pdxS]]-[[pdxT]]-[[serS]]'' mRNA upstream of ''[[dacA]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}} <br /> * processing of the ''[[ddl]]-[[murF]]'' mRNA upstream of ''[[ddl]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}} <br /> * processing of the ''[[yfjN]]'' leader mRNA, requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}} <br /> * processing of the ''[[glnR]]-[[glnA]]'' operon mRNA between ''[[glnR]]'' and ''[[glnA]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}} <br /> * processing of the ''[[menA]]'' leader mRNA, requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * processing of the ''[[metN]]-[[metP]]-[[metQ]]'' operon mRNA between ''[[metP]]'' and ''[[metQ]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}} <br /> * processing of the ''[[ydiG]]-[[rex]]-[[tatAY]]-[[tatCY]]'' operon mRNA between ''[[rex]]'' and ''[[tatAY]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * processing of the ''[[rplGB]]-[[rpsL]]-[[rpsG]]-[[fusA]]-[[tufA]]'' operon mRNA between ''[[rplGB]]'' and ''[[rpsL]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * processing of the ''[[rpoB]]-[[rpoC]]'' leader mRNA, requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * processing of the ''[[rpoE]]-[[pyrG]]'' operon mRNA between ''[[rpoE]]'' and ''[[pyrG]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * processing of the ''[[ruvA]]-[[ruvB]]-[[yrzS]]-[[queA]]-[[tgt]]-[[yrbF]]'' operon mRNA between ''[[tgt]]'' and ''[[yrbF]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * processing of the ''[[tagA]]-[[tagB]]'' mRNA upstream of ''[[tagA]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * processing of the ''[[ybfG]]-[[ybfF]]-[[ybfE]]'' operon mRNA between ''[[ybfG]]'' and ''[[ybfF]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}} <br /> * processing of the ''[[ylxM]]-[[ffh]]-[[rpsP]]-[[ylqC]]-[[ylqD]]-[[rimM]]-[[trmD]]-[[rplS]]'' operon mRNA between ''[[ffh]]'' and ''[[rpsP]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * processing of the ''[[yonR]]-[[yonS]]'' operon mRNA between ''[[yonR]]'' and ''[[yonS]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}} <br /> * processing of the ''[[yqhL]]'' leader mRNA {{PubMed|29794222}}<br /> * processing of the ''[[ywzH]]-[[dltA]]-[[dltB]]-[[dltC]]-[[dltD]]-[[dltE]]'' operon mRNA between ''[[ywzH]]'' and ''[[dltA]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * initiates the degradation of ''[[rpsO]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex mRNA {{PubMed|20418391}}<br /> * ''[[infC]]-[[rpmI]]-[[rplT]]'' mRNA, requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|21843271}}<br /> * leader of the ''[[cwlO]]'' mRNA, requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222,24163346}}<br /> <br /> <br /> === [[riboswitch|Riboswitch]] RNAs cleaved by [[rny|RNase Y]] ===<br /> <br /> * the [[S-box]] [[riboswitch]] RNAs ''in vivo'' and ''in vitro'' {{PubMed|29794222,19779461}}<br /> * ''[[hisS]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * ''[[ileS]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * ''[[nupG]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * ''[[thrS]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * ''[[thrZ]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * ''[[trpS]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}<br /> * ''[[tyrS]]'', requires the [[protein|YmcA]]-[[protein|YlbF]]-[[protein|YaaT]] complex {{PubMed|29794222}}</div>

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