SR4 - Revision history

Jstuelk at 08:14, 4 August 2015

2015-08-04T08:14:58Z

134.76.38.147 at 15:23, 2 April 2014

2014-04-02T15:23:30Z

Jstuelk at 15:20, 28 August 2013

2013-08-28T15:20:31Z

Jstuelk: /* References */

2013-08-28T15:17:43Z

‎References

Jstuelk at 16:00, 11 January 2012

2012-01-11T16:00:31Z

Jstuelk at 15:54, 11 January 2012

2012-01-11T15:54:15Z

Jstuelk: Created page with "* '''Description:''' antitoxin RNA, inhibits'' bsrG'' expression

{| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Ge..."

2012-01-11T15:53:33Z

Created page with "* '''Description:''' antitoxin RNA, inhibits'' bsrG'' expression {| align="right" border="1" cellpadding="2" |- |style="background:#ABCDEF;" align="center"|'''Ge..."

New page

* '''Description:''' antitoxin RNA, inhibits'' [[bsrG]]'' expression 

{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''SR4''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || '' ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || antitoxin RNA
|-
|style="background:#ABCDEF;" align="center"|'''Function''' ||inhibition of [[BsrG]] toxin expression
|-
|style="background:#ABCDEF;" align="center"| '''Gene length''' || 180 bp
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bsrG]]'', ''[[yokL]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA sequence '''
|-
|colspan="2" | '''Genetic context''' [[Image:bsrG_context.gif]]
<div align="right"> This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</div>
|-
|}

__TOC__

 

 
= [[Categories]] containing this gene/protein =
{{SubtiWiki category|[[toxins, antitoxins and immunity against toxins]]}},
{{SubtiWiki category|[[SPß prophage]]}},
{{SubtiWiki category|[[ncRNA]]}}

= This gene is a member of the following [[regulons]] =

=The gene=

=== Basic information ===

* '''Locus tag:'''

===Phenotypes of a mutant ===
* cell lysis on agar plates {{PubMed|22229825}}

=== Database entries ===

* '''DBTBS entry:''' no entry

* '''SubtiList entry:''' no entry

* '''Structure:'''

=== Additional information===

=Expression and regulation=

* '''Operon:''' ''[[SR4]]'' {{PubMed|22229825}}

* '''Sigma factor:''' [[SigA]] {{PubMed|22229825}}

* '''Regulation:'''

* '''Regulatory mechanism:'''

* '''Additional information:'''
** half-life of the mRNA: 3 min {{PubMed|22229825}}
** maturation of the RNA requires [[PnpA]] {{PubMed|22229825}}

=Biological materials =

* '''Mutant:'''

* '''Expression vector:'''

* '''lacZ fusion:'''

=Labs working on this gene/RNA=

[[Sabine Brantl]], Jena, Germany

=Your additional remarks=

=References=
'''Additional publications:''' {{PubMed|22229825}}
<pubmed></pubmed>

[[Category:Small RNA]]

@@ Line 89: / Line 89: @@
 =References=
-<pubmed> 23969414 22229825</pubmed>
+<pubmed> 23969414 22229825 26234942</pubmed>
 [[Category:Small RNA]]

← Older revision		Revision as of 15:23, 2 April 2014
Line 46:		Line 46:

	=== Database entries ===		=== Database entries ===
		+	* '''BsubCyc:''' [http://bsubcyc.org/BSUB/NEW-IMAGE?type=NIL&object=?&redirect=T ?]

	* '''DBTBS entry:''' no entry		* '''DBTBS entry:''' no entry

@@ Line 1: / Line 1: @@
-* '''Description:''' antitoxin RNA, inhibits'' [[bsrG]]'' expression <br/><br/>
+* '''Description:''' antitoxin RNA, inhibits'' [[bsrG]]'' translation and causes destabilization of the ''[[bsrG]]'' mRNA <br/><br/>
 {| align="right" border="1" cellpadding="2"
@@ Line 57: / Line 57: @@
 =The RNA=
+binds  the ''[[bsrG]]'' mRNA and triggers its degradation {{PubMed|22229825}}, moreover SR4 inhibits ''[[bsrG]]'' translation {{PubMed|23969414}}
 =Expression and regulation=

← Older revision		Revision as of 16:00, 11 January 2012
Line 55:		Line 55:
	=== Additional information===		=== Additional information===

		+
		+	=The RNA=
		+
		+	binds the ''[[bsrG]]'' mRNA and triggers its degradation {{PubMed\|22229825}}

	=Expression and regulation=		=Expression and regulation=

← Older revision		Revision as of 15:54, 11 January 2012
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	__TOC__		__TOC__
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−	~~<br/><br/>~~

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