Rnz - Revision history

Jstuelk: /* Original Publications */

2015-04-26T15:09:57Z

‎Original Publications

2015-04-26T15:08:32Z

‎Reviews

2015-02-05T16:18:52Z

2014-11-18T12:38:13Z

2014-04-17T14:20:40Z

2014-04-17T10:02:10Z

2014-04-02T14:09:11Z

2013-05-16T13:50:52Z

2013-05-14T10:39:35Z

2013-05-13T13:13:55Z

@@ Line 147: / Line 147: @@
 ==Original Publications==
-<pubmed>17005971 12941704 15654328 16518398 22940585 25402410</pubmed>
+<pubmed>17005971 12941704 15654328 16518398 22940585 25402410  24022488</pubmed>
 [[Category:Protein-coding genes]]

@@ Line 144: / Line 144: @@
 =References=
 ==Reviews==
-<pubmed> 19215776 17599240 </pubmed>
+<pubmed> 19215776 17599240 25878039</pubmed>
 ==Original Publications==
 <pubmed>17005971 12941704 15654328 16518398 22940585 25402410</pubmed>
 [[Category:Protein-coding genes]]

@@ Line 20: / Line 20: @@
 |style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 921 bp, 307 aa
 |-
-|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqjL]]'', ''[[zwf]]''
+|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[rpmGC]]'', ''[[zwf]]''
 |-
 |style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23840 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23840 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23840 DNA_with_flanks]

@@ Line 63: / Line 63: @@
 === Additional information===
 =The protein=
@@ Line 71: / Line 68: @@
 === Basic information/ Evolution ===
-* '''Catalyzed reaction/ biological activity:''' Endonucleolytic cleavage of RNA, removing extra 3' nucleotides from tRNA precursor, generating 3' termini of tRNAs (according to Swiss-Prot)
+* '''Catalyzed reaction/ biological activity:'''
 * '''Protein family:''' [[RNase]] Z family (according to Swiss-Prot)
@@ Line 146: / Line 145: @@
 ==Reviews==
 <pubmed> 19215776 17599240 </pubmed>
 ==Original Publications==
-<pubmed>17005971 12941704 15654328 16518398 22940585</pubmed>
+<pubmed>17005971 12941704 15654328 16518398 22940585 25402410</pubmed>
 [[Category:Protein-coding genes]]

@@ Line 120: / Line 120: @@
 * '''Additional information:'''
 ** number of protein molecules per cell (minimal medium with glucose and ammonium): 55 {{PubMed|24696501}}
 =Biological materials =
 * '''Mutant:'''

← Older revision		Revision as of 10:02, 17 April 2014
Line 119:		Line 119:

	* '''Additional information:'''		* '''Additional information:'''
		+	** number of protein molecules per cell (minimal medium with glucose and ammonium): 55 {{PubMed\|24696501}}

	=Biological materials =		=Biological materials =

@@ Line 56: / Line 56: @@
 === Database entries ===
 * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/yqjK.html]
@@ Line 93: / Line 94: @@
 === Database entries ===
 * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=2FK6 2FK6] (in complex with tRNA-Thr) {{PubMed|22940585}},  [http://www.rcsb.org/pdb/explore.do?structureId=1Y44 1Y44]

@@ Line 27: / Line 27: @@
   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 |-
-|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rnz_2478006_2478929_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:rnz_expression.png|500px]]
+|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=rnz_2478006_2478929_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:rnz_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23840]]
 |-
 |}

@@ Line 22: / Line 22: @@
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqjL]]'', ''[[zwf]]''
 |-
-|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23840 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23840 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23840 Advanced_DNA]
+|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23840 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23840 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23840 DNA_with_flanks]
 |-
 |colspan="2" | '''Genetic context''' <br/> [[Image:yqjK_context.gif]]

@@ Line 14: / Line 14: @@
 |style="background:#ABCDEF;" align="center"|'''Function''' || processing of CCA-less tRNA precursors
 |-
-|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU23840 rnz]
+|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU23840 rnz]
 |-
 |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 33 kDa, 5.805
@@ Line 22: / Line 22: @@
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yqjL]]'', ''[[zwf]]''
 |-
-|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB14316&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU23840 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU23840 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU23840 Advanced_DNA]
 |-
 |colspan="2" | '''Genetic context''' <br/> [[Image:yqjK_context.gif]]