QueE - Revision history

Jstuelk at 09:31, 4 May 2015

2015-05-04T09:31:13Z

2014-04-02T13:33:20Z

2014-02-12T16:40:43Z

‎References

2013-05-16T13:07:20Z

2013-05-14T10:03:17Z

2013-05-13T12:40:33Z

2012-12-02T15:52:40Z

‎References

2012-12-02T15:51:51Z

2012-12-02T15:51:16Z

2012-08-07T08:57:00Z

@@ Line 15: / Line 15: @@
 |-
 |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13740 queE]
 |-
 |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 26 kDa, 4.962
@@ Line 84: / Line 86: @@
 * '''[[SubtInteract|Interactions]]:'''
 * '''[[Localization]]:'''
@@ Line 135: / Line 138: @@
 =References=
-<pubmed>14660578,19285444, 19354300 17384645 24362703 23194065</pubmed>
+<pubmed>14660578,19285444, 19354300 17384645 24362703 23194065 25933252</pubmed>
 [[Category:Protein-coding genes]]

@@ Line 52: / Line 52: @@
 === Database entries ===
 * '''DBTBS entry:''' no entry
@@ Line 87: / Line 88: @@
 === Database entries ===
 * '''Structure:'''

@@ Line 133: / Line 133: @@
 =References=
-'''Additional publications:''' {{PubMed|23194065}}
+<pubmed>14660578,19285444, 19354300 17384645 24362703 23194065</pubmed>
 [[Category:Protein-coding genes]]

@@ Line 27: / Line 27: @@
   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 |-
-|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=queE_1440542_1441273_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:queE_expression.png|500px]]
+|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=queE_1440542_1441273_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:queE_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13740]]
 |-
 |}

@@ Line 22: / Line 22: @@
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[queD]]'', ''[[queF]]''
 |-
-|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13740 Advanced_DNA]
+|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13740 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13740 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13740 DNA_with_flanks]
 |-
 |colspan="2" | '''Genetic context''' <br/> [[Image:ykvL_context.gif]]

@@ Line 104: / Line 104: @@
 * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=queE_1440542_1441273_1 queE] {{PubMed|22383849}}
-* '''Sigma factor:'''
+* '''[[Sigma factor]]:'''
 * '''Regulation:'''
@@ Line 134: / Line 134: @@
 =References=
-<pubmed>14660578,19285444, 19354300 17384645 23194065 </pubmed>
+<pubmed>14660578,19285444, 19354300 17384645 23194065</pubmed>
 [[Category:Protein-coding genes]]

@@ Line 1: / Line 1: @@
-* '''Description:''' synthesis of the modified ribonucleotide queuosine <br/><br/>
+* '''Description:''' 7-carboxy-7-deazaguanine (CDG) synthase, required for the synthesis of the modified ribonucleotide queuosine <br/><br/>
 {| align="right" border="1" cellpadding="2"
@@ Line 10: / Line 10: @@
 |style="background:#ABCDEF;" align="center"| '''Essential''' || no
 |-
-|style="background:#ABCDEF;" align="center"| '''Product''' || unknown
+|style="background:#ABCDEF;" align="center"| '''Product''' || 7-carboxy-7-deazaguanine (CDG) synthase
 |-
 |style="background:#ABCDEF;" align="center"|'''Function''' || tRNA modification
@@ Line 35: / Line 35: @@
 <br/><br/><br/><br/>
 <br/><br/><br/><br/>
 <br/><br/>
@@ Line 62: / Line 58: @@
 === Additional information===
 =The protein=
 === Basic information/ Evolution ===
 * '''Catalyzed reaction/ biological activity:'''
-* '''Protein family:'''
+* '''Protein family:''' radical S-adenosyl-L-methionine (SAM) superfamily
 * '''Paralogous protein(s):'''
@@ Line 84: / Line 78: @@
 * '''Modification:'''
-* '''Cofactor(s):'''
+* '''Cofactor(s):''' [4Fe-4S] cluster, S-adenosyl-L-methionine, Mg(2+) {{PubMed|23194065}}
 * '''Effectors of protein activity:'''
@@ Line 140: / Line 134: @@
 =References=
-<pubmed>14660578,19285444, 19354300 17384645 </pubmed>
+<pubmed>14660578,19285444, 19354300 17384645 23194065 </pubmed>
 [[Category:Protein-coding genes]]