OhrR - Revision history

Jstuelk: /* References */

2015-04-10T11:02:12Z

‎References

2015-04-10T11:01:45Z

‎Reviews

2014-04-17T10:01:05Z

2014-04-02T13:31:11Z

2013-12-13T19:18:58Z

‎The protein

2013-12-13T19:13:24Z

2013-12-13T18:53:57Z

2013-05-16T13:05:04Z

2013-05-14T10:01:00Z

2013-05-13T12:38:13Z

@@ Line 148: / Line 148: @@
 ==Reviews==
 <pubmed>22797754 20626317 19575568  20094649  25852656</pubmed>
 ==Original Publications==
 <pubmed>21749987,16209951,18487332,17660290,17502599,12486061,11418552,18586944,11983871,18363800,19129220 9696771 21749987 22797754 24313874 </pubmed>
 [[Category:Protein-coding genes]]

@@ Line 147: / Line 147: @@
 =References=
 ==Reviews==
-<pubmed>22797754 20626317 19575568  20094649 </pubmed>
+<pubmed>22797754 20626317 19575568  20094649  25852656</pubmed>
 ==Original Publications==
 <pubmed>21749987,16209951,18487332,17660290,17502599,12486061,11418552,18586944,11983871,18363800,19129220 9696771 21749987 22797754 24313874 </pubmed>
 [[Category:Protein-coding genes]]

← Older revision		Revision as of 10:01, 17 April 2014
Line 122:		Line 122:

	* '''Additional information:'''		* '''Additional information:'''
		+	** number of protein molecules per cell (minimal medium with glucose and ammonium): 133 {{PubMed\|24696501}}

	=Biological materials =		=Biological materials =

@@ Line 56: / Line 56: @@
 === Database entries ===
 * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/ykmA.html]
@@ Line 96: / Line 97: @@
 === Database entries ===
 * '''Structure:''' [http://www.rcsb.org/pdb/explore.do?structureId=1Z91 1Z91] (reduced form),  [http://www.rcsb.org/pdb/explore.do?structureId=1Z9C 1Z9C] (complex with ''[[ohrA]]'' promoter)

@@ Line 90: / Line 90: @@
 * '''[[SubtInteract|Interactions]]:'''
 ** forms dimers
-** [[BrxA]]-[[OhrR]] {{PubMed|24313874}}
+** [[BrxA]]-[[OhrR]], to de-bacillithiolate S-bacillithiolated [[OhrR]] {{PubMed|24313874}}
-** [[BrxB]]-[[OhrR]] {{PubMed|24313874}}
+** [[BrxB]]-[[OhrR]], to de-bacillithiolate S-bacillithiolated [[OhrR]] {{PubMed|24313874}}
 * '''[[Localization]]:''' cytoplasm (according to Swiss-Prot)

@@ Line 15: / Line 15: @@
 |-
 |colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13150 ohrR]
 |-
 |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 16 kDa, 6.364
@@ Line 88: / Line 90: @@
 * '''[[SubtInteract|Interactions]]:'''
 ** forms dimers
 * '''[[Localization]]:''' cytoplasm (according to Swiss-Prot)

@@ Line 35: / Line 35: @@
 <br/><br/><br/><br/>
 <br/><br/><br/><br/>
 <br/><br/><br/>
@@ Line 80: / Line 76: @@
 * '''Kinetic information:'''
-* '''Domains:'''
+* '''[[Domains]]:'''
 * '''Modification:'''
@@ Line 86: / Line 82: @@
 ** S-bacillithiolated by NaOCl and CHP stress on Cys-15, this results in release from the'' [[ohrA]]'' promoter {{PubMed|21749987}}
-* '''Cofactor(s):'''
+* '''[[Cofactors]]:'''
 * '''Effectors of protein activity:'''
@@ Line 113: / Line 109: @@
 * '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ohrR_1381434_1381877_-1 ohrR] {{PubMed|22383849}}
-* '''Sigma factor:''' [[SigA]]
+* '''[[Sigma factor]]:''' [[SigA]]
 * '''Regulation:'''
@@ Line 143: / Line 139: @@
 =References=
 ==Reviews==
-<pubmed>22797754 </pubmed>
+<pubmed>22797754 20626317 19575568  20094649 </pubmed>
 ==Original Publications==
-<pubmed>21749987,16209951,18487332,17660290,17502599,12486061,11418552,18586944,11983871,18363800,19129220 9696771 21749987 22797754 </pubmed>
+<pubmed>21749987,16209951,18487332,17660290,17502599,12486061,11418552,18586944,11983871,18363800,19129220 9696771 21749987 22797754 24313874 </pubmed>
 [[Category:Protein-coding genes]]

@@ Line 27: / Line 27: @@
   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 |-
-|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ohrR_1381434_1381877_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ohrR_expression.png|500px]]
+|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=ohrR_1381434_1381877_-1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:ohrR_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU13150]]
 |-
 |}

@@ Line 22: / Line 22: @@
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[ohrA]]'', ''[[ohrB]]''
 |-
-|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13150 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13150 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13150 Advanced_DNA]
+|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU13150 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU13150 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU13150 DNA_with_flanks]
 |-
 |colspan="2" | '''Genetic context''' <br/> [[Image:ykmA_context.gif]]