MhqA - Revision history

Jstuelk at 08:58, 25 June 2019

2019-06-25T08:58:05Z

2014-04-17T10:00:05Z

2014-04-02T13:30:08Z

2013-05-16T13:03:59Z

2013-05-14T09:59:55Z

2013-05-13T12:37:19Z

2012-08-08T11:02:25Z

2012-08-07T08:13:21Z

2012-04-19T07:51:54Z

2012-04-13T07:21:09Z

@@ Line 74: / Line 74: @@
 * '''Catalyzed reaction/ biological activity:'''
-* '''Protein family:''' extradiol ring-cleavage dioxygenase family (according to Swiss-Prot)
+* '''Protein family:''' extradiol ring-cleavage dioxygenase family (according to UniProt)
 * '''Paralogous protein(s):''' [[MhqE]], [[MhqO]]

← Older revision		Revision as of 10:00, 17 April 2014
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	* '''Additional information:'''		* '''Additional information:'''
		+	** number of protein molecules per cell (minimal medium with glucose and ammonium): 183 {{PubMed\|24696501}}

	=Biological materials =		=Biological materials =

@@ Line 57: / Line 57: @@
 === Database entries ===
 * '''DBTBS entry:''' [http://dbtbs.hgc.jp/COG/prom/mhqA.html]
@@ Line 94: / Line 95: @@
 === Database entries ===
 * '''Structure:''' [http://www.rcsb.org/pdb/explore/explore.do?pdbId=3OAJ 3OAJ] ([[MhqO]], 34% identical residues)

@@ Line 28: / Line 28: @@
   <div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
 |-
-|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mhqA_1353080_1354030_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:mhqA_expression.png|500px]]
+|colspan="2" |'''[http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mhqA_1353080_1354030_1 Expression at a glance]'''&#160;&#160;&#160;{{PubMed|22383849}}<br/>[[Image:mhqA_expression.png|500px|link=http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU12870]]
 |-
 |}

@@ Line 21: / Line 21: @@
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[steT]]'', ''[[ykcB]]''
 |-
-|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12870 Advanced_DNA]
+|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12870 DNA_with_flanks]
 |-
 |-

@@ Line 13: / Line 13: @@
 |style="background:#ABCDEF;" align="center"|'''Function''' || resistence to methyl-hydroxyquinone
 |-
-|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://cellpublisher.gobics.de/subtiexpress/ ''Subti''Express]''': [http://cellpublisher.gobics.de/subtiexpress/bsu/BSU12870 mhqA]
+|colspan="2" style="background:#FAF8CC;" align="center"| '''Gene expression levels in [http://subtiwiki.uni-goettingen.de/apps/expression/ ''Subti''Express]''': [http://subtiwiki.uni-goettingen.de/apps/expression/expression.php?search=BSU12870 mhqA]
 |-
 |style="background:#ABCDEF;" align="center"| '''MW, pI''' || 35 kDa, 5.404
@@ Line 21: / Line 21: @@
 |style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[steT]]'', ''[[ykcB]]''
 |-
-|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+&#91;EMBLCDS:CAB13144&#93;+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
+|style="background:#FAF8CC;" align="center"|'''Sequences'''||[http://bsubcyc.org/BSUB/sequence-aa?type=GENE&object=BSU12870 Protein] [http://bsubcyc.org/BSUB/sequence?type=GENE&object=BSU12870 DNA] [http://bsubcyc.org/BSUB/seq-selector?chromosome=CHROM-1&object=BSU12870 Advanced_DNA]
 |-
 |-

@@ Line 1: / Line 1: @@
+* '''Description:''' hydroquinone-specific dioxygenase, confers resistence to methyl-hydroxyquinone <br/><br/>
 {| align="right" border="1" cellpadding="2"
 |-

@@ Line 100: / Line 100: @@
 * '''Operon:''' ''mhqA'' {{PubMed|17725564}}
-* '''[[Sigma factor]]:''' [[SigA]] {{PubMed|17725564}}
+* '''Expression browser:''' [http://genome.jouy.inra.fr/cgi-bin/seb/viewdetail.py?id=mhqA_1353080_1354030_1 mhqA] {{PubMed|22383849}}
 * '''Regulation:'''