ywdJ

ywdJ
168

unknown

Locus
BSU_37940
Molecular weight
49.81 kDa
Isoelectric point
10.02
Protein length
440 aaSequenceBlast
Gene length
1323 bpSequenceBlast
Function
unknown
Product
unknown
Essential
no
E.C.
null
Synonyms
ywdJ, ipa-60d
Outlinks
BsubCyc SubtiList UniProt STRING Genoscapist PaperBLAST

Genomic Context

Categories containing this gene/protein

List of homologs in different organisms, belongs to COG2233 (Galperin et al., 2021)

This gene is a member of the following regulons

Gene
Coordinates
3,894,463 → 3,895,785
The protein
Protein family
xanthine/uracil permease family (according to UniProt)
Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily (according to UniProt)
Structure
P39618 (AlphaFold)
Localization
cell membrane (according to UniProt)
Expression and Regulation
Operons
Genes
ywdI-ywdJ-ywdK
Description
PubMed
Regulation
repressed in the absence of good nitrogen sources (glutamine or ammonium) (TnrA) PubMed
Regulatory mechanism
TnrA: repression, PubMed, in tnrA regulon
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ywdI→ywdK

2025-03-26 23:08:23

ghost

103

934ef991fa99a8444224b936224b066ff8c1cc63

20D221491A6DC4AB5B098EEFBD3592C8D3A7B156

Biological materials
Mutant
MGNA-A565 (ywdJ::erm), available at the NBRP B. subtilis, Japan
BKE37940 (ΔywdJ::erm  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TTTCACGTAAGCTCAACCTC,  downstream forward: _UP4_TGAATTTTGGTGCAGGTGCG
BKK37940 (ΔywdJ::kan  trpC2) available at BGSC,  PubMed, upstream reverse: _UP1_TTTCACGTAAGCTCAACCTC,  downstream forward: _UP4_TGAATTTTGGTGCAGGTGCG
BP1259 (ywdJ::cat trp+) available in Jörg Stülke's & Fabian Commichau's lab
References
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BA4D8EF5B09345E94EEEEB936C803B71340DC5EE

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Time of last update: 2025-04-02 07:50:52

Author of last update: Melvin.boenninger