SubtiWiki - User contributions [en]

BceB

2010-01-04T16:52:11Z

Foglino: /* References */

* '''Description:''' bacitracin ABC transporter (permease) for bacitracin export <br/><br/>

{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''ytsD''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''bceB ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || bacitracin ABC transporter (permease)
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || bacitracin export
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 72 kDa, 9.79
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 1938 bp, 646 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[yttA]]'', ''[[bceA]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB15015]+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:ytsD_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|}

__TOC__

<br/><br/>

=The gene=

=== Basic information ===

* '''Locus tag:''' BSU30370

===Phenotypes of a mutant ===

=== Database entries ===

* '''DBTBS entry:''' no entry

* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13921]

=== Additional information===

=The protein=

=== Basic information/ Evolution ===

* '''Catalyzed reaction/ biological activity:'''

* '''Protein family:''' ABC-4 integral membrane protein family (according to Swiss-Prot)

* '''Paralogous protein(s):'''

=== Extended information on the protein ===

* '''Kinetic information:'''

* '''Domains:'''

* '''Modification:'''

* '''Cofactor(s):'''

* '''Effectors of protein activity:'''

* '''Interactions:'''

* '''Localization:''' cell membrane (according to Swiss-Prot)

=== Database entries ===

* '''Structure:'''

* '''UniProt:''' [http://www.uniprot.org/uniprot/O34741 O34741]

* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU30370]

* '''E.C. number:'''

=== Additional information===

=Expression and regulation=
* '''Operon:''' ''[[bceA]]-[[bceB]]'' {{PubMed|12890034}}

* '''[[Sigma factor]]:'''

* '''Regulation:'''
** induced in the presence of bacitracin ([[BceR]]) {{PubMed|12890034}}

* '''Regulatory mechanism:'''
** [[BceR]]: transcription activation {{PubMed|12890034}}

* '''Additional information:'''

=Biological materials =

* '''Mutant:'''

* '''Expression vector:'''

* '''lacZ fusion:'''

* '''GFP fusion:'''

* '''two-hybrid system:'''

* '''Antibody:'''

=Labs working on this gene/protein=

=Your additional remarks=

=References=

<pubmed>18394148,17905982,12890034,14651641,10092453, </pubmed>

[[Category:Protein-coding genes]]

BceA

2010-01-04T16:47:06Z

Foglino: /* References */

* '''Description:''' bacitracin ABC transporter (ATP-binding protein) for bacitracin export <br/><br/>

{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''ytsC''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''bceA ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || bacitracin ABC transporter (ATP-binding protein)
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || bacitracin export
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 9.287
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 759 bp, 253 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bceB]]'', ''[[bceS]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB15016]+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:ytsC_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|}

__TOC__

<br/><br/>

=The gene=

=== Basic information ===

* '''Locus tag:''' BSU30380

===Phenotypes of a mutant ===

=== Database entries ===

* '''DBTBS entry:''' no entry

* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13920]

=== Additional information===

=The protein=

=== Basic information/ Evolution ===

* '''Catalyzed reaction/ biological activity:'''

* '''Protein family:''' ABC transporter family (according to Swiss-Prot)

* '''Paralogous protein(s):'''

=== Extended information on the protein ===

* '''Kinetic information:'''

* '''Domains:'''

* '''Modification:'''

* '''Cofactor(s):'''

* '''Effectors of protein activity:'''

* '''Interactions:'''

* '''Localization:'''

=== Database entries ===

* '''Structure:'''

* '''UniProt:''' [http://www.uniprot.org/uniprot/O34697 O34697]

* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU30380]

* '''E.C. number:'''

=== Additional information===

=Expression and regulation=
* '''Operon:''' ''[[bceA]]-[[bceB]]'' {{PubMed|12890034}}

* '''[[Sigma factor]]:'''

* '''Regulation:'''
** induced in the presence of bacitracin ([[BceR]]) {{PubMed|12890034}}

* '''Regulatory mechanism:'''
** [[BceR]]: transcription activation {{PubMed|12890034}}

* '''Additional information:'''

=Biological materials =

* '''Mutant:'''

* '''Expression vector:'''

* '''lacZ fusion:'''

* '''GFP fusion:'''

* '''two-hybrid system:'''

* '''Antibody:'''

=Labs working on this gene/protein=
Foglino M. {{PubMed|17905982}}

=Your additional remarks=

=References=

<pubmed> 17905982 ,18394148,12890034,14651641,10092453, </pubmed>

[[Category:Protein-coding genes]]

BceA

2010-01-04T16:45:31Z

Foglino: /* Labs working on this gene/protein */

* '''Description:''' bacitracin ABC transporter (ATP-binding protein) for bacitracin export <br/><br/>

{| align="right" border="1" cellpadding="2"
|-
|style="background:#ABCDEF;" align="center"|'''Gene name'''
|''ytsC''
|-
|style="background:#ABCDEF;" align="center"| '''Synonyms''' || ''bceA ''
|-
|style="background:#ABCDEF;" align="center"| '''Essential''' || no
|-
|style="background:#ABCDEF;" align="center"| '''Product''' || bacitracin ABC transporter (ATP-binding protein)
|-
|style="background:#ABCDEF;" align="center"|'''Function''' || bacitracin export
|-
|style="background:#ABCDEF;" align="center"| '''MW, pI''' || 28 kDa, 9.287
|-
|style="background:#ABCDEF;" align="center"| '''Gene length, protein length''' || 759 bp, 253 aa
|-
|style="background:#ABCDEF;" align="center"|'''Immediate neighbours''' || ''[[bceB]]'', ''[[bceS]]''
|-
|colspan="2" style="background:#FAF8CC;" align="center"|'''Get the DNA and protein [http://srs.ebi.ac.uk/srsbin/cgi-bin/wgetz?-e+[EMBLCDS:CAB15016]+-newId sequences] <br/> (Barbe ''et al.'', 2009)'''
|-
|colspan="2" | '''Genetic context''' <br/> [[Image:ytsC_context.gif]]
<div align="right"> <small>This image was kindly provided by [http://genolist.pasteur.fr/SubtiList/ SubtiList]</small></div>
|-
|}

__TOC__

<br/><br/>

=The gene=

=== Basic information ===

* '''Locus tag:''' BSU30380

===Phenotypes of a mutant ===

=== Database entries ===

* '''DBTBS entry:''' no entry

* '''SubtiList entry:''' [http://genolist.pasteur.fr/SubtiList/genome.cgi?gene_detail+BG13920]

=== Additional information===

=The protein=

=== Basic information/ Evolution ===

* '''Catalyzed reaction/ biological activity:'''

* '''Protein family:''' ABC transporter family (according to Swiss-Prot)

* '''Paralogous protein(s):'''

=== Extended information on the protein ===

* '''Kinetic information:'''

* '''Domains:'''

* '''Modification:'''

* '''Cofactor(s):'''

* '''Effectors of protein activity:'''

* '''Interactions:'''

* '''Localization:'''

=== Database entries ===

* '''Structure:'''

* '''UniProt:''' [http://www.uniprot.org/uniprot/O34697 O34697]

* '''KEGG entry:''' [http://www.genome.jp/dbget-bin/www_bget?bsu:BSU30380]

* '''E.C. number:'''

=== Additional information===

=Expression and regulation=
* '''Operon:''' ''[[bceA]]-[[bceB]]'' {{PubMed|12890034}}

* '''[[Sigma factor]]:'''

* '''Regulation:'''
** induced in the presence of bacitracin ([[BceR]]) {{PubMed|12890034}}

* '''Regulatory mechanism:'''
** [[BceR]]: transcription activation {{PubMed|12890034}}

* '''Additional information:'''

=Biological materials =

* '''Mutant:'''

* '''Expression vector:'''

* '''lacZ fusion:'''

* '''GFP fusion:'''

* '''two-hybrid system:'''

* '''Antibody:'''

=Labs working on this gene/protein=
Foglino M. {{PubMed|17905982}}

=Your additional remarks=

=References=

<pubmed>18394148,12890034,14651641,10092453, </pubmed>

[[Category:Protein-coding genes]]

Labs working on Bacillus

2010-01-04T16:37:15Z

Foglino: /* This is a partial list of groups working with Bacillus subtilis */

==If you don't find your own lab, please feel free to add a page==

For help, see the [http://www.subtiwiki.uni-goettingen.de/otherFiles/tutorial.pps tutorial] or [mailto:jstuelk@gwdg.de ask us]
Foglino

==This is a partial list of groups working with ''Bacillus subtilis''==

* [[Alessandra Albertini]]
* [[Arthur Aronson]]
* [[Stephane Aymerich]]
* [[Imrich Barak]]
* [[David Bechhofer]]
* [[Melanie Barker Berkmen]]
* [[Sabine Brantl]]
* [[Erhard Bremer]]
* [[Richard Brennan]]
* [[Ciaran Condon]]
* [[Simon Cutting]]
* [[Diego de Mendoza]]
* [[Isabel de Sa-Nogueira]]
* [[Nathalie Declerck]]
* [[Kevin Devine]]
* [[Josef Deutscher]]
* [[Jan Maarten van Dijl]]
* [[Patrick Eichenberger]]
* [[Jeff Errington]]
* [[Susan Fisher]]
* [[Maryline Foglino]]
* [[Yasutaro Fujita]]
* [[Anne Galinier]]
* [[Boris Görke]]
* [[Peter Graumann]]
* [[Alan Grossman]]
* [[Bill Haldenwang]]
* [[Leendert Hamoen]]
* [[Liz Harry]]
* [[Elisabeth Härtig]]
* [[Roland Hartmann]]
* [[Colin Harwood]]
* [[Michael Hecker]]
* [[Lars Hederstedt]]
* [[John Helmann]]
* [[Tina Henkin]]
* [[Adriano Henriques]]
* [[Wolfgang Hillen]]
* [[Jim Hoch]]
* [[Marion Hulett]]
* [[Laurent Janniere]]
* [[Hanne Jarmer]]
* [[Mark J. Jedrzejas]]
* [[Bernard Joris]]
* [[Daniel Kearns]]
* [[Oscar Kuipers]]
* [[Peter Lewis]]
* [[Rick Lewis]]
* [[Richard Losick]]
* [[Mohamed Marahiel]]
* [[Isabelle Martin-Verstraete]]
* [[Thorsten Mascher]]
* [[Ivan Mijakovic]]
* [[Anne Moir]]
* [[Charles Moran]]
* [[Michiko Nakano]]
* [[Philippe Noirot]]
* [[Naotake Ogasawara]]
* [[Patrick Piggot]]
* [[Chet Price]]
* [[Harald Putzer]]
* [[Milton H. Saier]]
* [[Margarita Salas]]
* [[Uwe Sauer]]
* [[Wolfgang Schumann]]
* [[Linc Sonenshein]]
* [[Mark Strauch]]
* [[Jörg Stülke]]
* [[Hendrik Szurmant]]
* [[Kürsad Turgay]]
* [[User:Jwveening |Jan-Willem Veening]]
* [[Uwe Völker]]
* [[Claes von Wachenfeldt]]
* [[Thomas Wiegert]]
* [[Tony Wilkinson]]
* [[Wade Winkler]]
* [[Ronald Yasbin]]
* [[Ken-ichi Yoshida]]
* [[Daniel R. Zeigler]]
* [[Peter Zuber]]

Labs working on Bacillus

2010-01-04T16:34:43Z

Foglino: /* If you don't find your own lab, please feel free to add a page */

==If you don't find your own lab, please feel free to add a page==

For help, see the [http://www.subtiwiki.uni-goettingen.de/otherFiles/tutorial.pps tutorial] or [mailto:jstuelk@gwdg.de ask us]
Foglino

==This is a partial list of groups working with ''Bacillus subtilis''==

* [[Alessandra Albertini]]
* [[Arthur Aronson]]
* [[Stephane Aymerich]]
* [[Imrich Barak]]
* [[David Bechhofer]]
* [[Melanie Barker Berkmen]]
* [[Sabine Brantl]]
* [[Erhard Bremer]]
* [[Richard Brennan]]
* [[Ciaran Condon]]
* [[Simon Cutting]]
* [[Diego de Mendoza]]
* [[Isabel de Sa-Nogueira]]
* [[Nathalie Declerck]]
* [[Kevin Devine]]
* [[Josef Deutscher]]
* [[Jan Maarten van Dijl]]
* [[Patrick Eichenberger]]
* [[Jeff Errington]]
* [[Susan Fisher]]
* [[Yasutaro Fujita]]
* [[Anne Galinier]]
* [[Boris Görke]]
* [[Peter Graumann]]
* [[Alan Grossman]]
* [[Bill Haldenwang]]
* [[Leendert Hamoen]]
* [[Liz Harry]]
* [[Elisabeth Härtig]]
* [[Roland Hartmann]]
* [[Colin Harwood]]
* [[Michael Hecker]]
* [[Lars Hederstedt]]
* [[John Helmann]]
* [[Tina Henkin]]
* [[Adriano Henriques]]
* [[Wolfgang Hillen]]
* [[Jim Hoch]]
* [[Marion Hulett]]
* [[Laurent Janniere]]
* [[Hanne Jarmer]]
* [[Mark J. Jedrzejas]]
* [[Bernard Joris]]
* [[Daniel Kearns]]
* [[Oscar Kuipers]]
* [[Peter Lewis]]
* [[Rick Lewis]]
* [[Richard Losick]]
* [[Mohamed Marahiel]]
* [[Isabelle Martin-Verstraete]]
* [[Thorsten Mascher]]
* [[Ivan Mijakovic]]
* [[Anne Moir]]
* [[Charles Moran]]
* [[Michiko Nakano]]
* [[Philippe Noirot]]
* [[Naotake Ogasawara]]
* [[Patrick Piggot]]
* [[Chet Price]]
* [[Harald Putzer]]
* [[Milton H. Saier]]
* [[Margarita Salas]]
* [[Uwe Sauer]]
* [[Wolfgang Schumann]]
* [[Linc Sonenshein]]
* [[Mark Strauch]]
* [[Jörg Stülke]]
* [[Hendrik Szurmant]]
* [[Kürsad Turgay]]
* [[User:Jwveening |Jan-Willem Veening]]
* [[Uwe Völker]]
* [[Claes von Wachenfeldt]]
* [[Thomas Wiegert]]
* [[Tony Wilkinson]]
* [[Wade Winkler]]
* [[Ronald Yasbin]]
* [[Ken-ichi Yoshida]]
* [[Daniel R. Zeigler]]
* [[Peter Zuber]]