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dprA [Thu Jan 21 2016 19:31:13 GMT+0100 (CET)]
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dprA [Thu Jan 21 2016 19:31:13 GMT+0100 (CET)]

conveys incoming ssDNA to RecA; facilitates the displacement of both SSBs (SsbB and SsbA), increases RecA nucleation onto SSB-coated ssDNA, and mediates DNA strand annealing, required to internalize and to recombine ssDNA with homologous resident duplex
locus
BSU16110
pI
9.00
mw
32.00 kDa
function
DNA repair/ recombination
product
recombination mediator protein
essential
no
synonyms
smf

Genomic Context

      

categories

  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination]
  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.5|DNA repair/ recombination] → [category|SW 3.1.5.6|Other proteins]
  • [category|SW 3|Information processing] → [category|SW 3.1|Genetics] → [category|SW 3.1.7|Genetic competence]
  • [category|SW 4|Lifestyles] → [category|SW 4.1|Exponential and early post-exponential lifestyles] → [category|SW 4.1.3|Genetic competence]
  • [SW|Categories] containing this gene/protein

  • [SW|DNA repair/ recombination], [SW|genetic competence]
  • This gene is a member of the following [SW|regulons]

  • [SW|ComK regulon]
  • Gene

    Coordinates on the chromosome (coding sequence)
    1,682,580 -> 1,683,473

    Phenotypes of a mutant

  • strongly impaired genetic recombination [Pubmed|23779106]
  • The protein

    Catalyzed reaction/ biological activity

  • binds ssDNA, promotes displacement of [protein|search|SsbA] and [protein|search|SsbB] from ssDNA [Pubmed|23779106]
  • provides [protein|search|RecA] access to ssDNA during chromosomal transformation (together with [protein|search|RecO]) [Pubmed|22373918]
  • RecA-ATP in concert with [protein|search|DprA] and [protein|search|SsbA] catalyzes DNA strand exchange, with [protein|search|SsbB] as an accessory factor [Pubmed|25138221]
  • Protein family

  • smf family (according to Swiss-Prot)
  • [SW|Localization]

  • transiently localizes to the cell pole, and co-localizes with the DNA uptake machinery [Pubmed|17630974]
  • [SW|Interactions]

  • forms dimers [Pubmed|23779106]
  • [protein|search|DprA]-[protein|search|RecA] [Pubmed|17803906,17630974]
  • [protein|search|DprA]-[protein|search|DprA] [Pubmed|17803906]
  • [protein|search|DprA]-[SW|ComFA] [Pubmed|17630974]
  • [protein|search|SsbB]-[protein|search|DprA] [Pubmed|17630974]
  • Expression and Regulation

    Operon

  • ''dprA'' (according to [http://dbtbs.hgc.jp/COG/prom/smf.html DBTBS])
  • Regulation

  • expressed under conditions that trigger genetic competence ([protein|search|ComK]) [Pubmed|11948146]
  • Regulatory mechanism

  • [protein|search|ComK]: transcription activation [Pubmed|11948146]
  • Labs working on this gene/protein

  • [SW|Peter Graumann], Freiburg University, Germany [http://www.biologie.uni-freiburg.de/data/bio2/graumann/index.htm homepage]
  • References

  • 17630974,17803906,12421306,18045469,11948146,22373918,23779106,23440217,25138221,26786319